Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0436 ATGGGATCACTAGAAAGATCAAGAAAGAAAGTCATGTTATGGAAGAAAGCCATGGTGCACTTTTCTCTATGTTTTGTGATGGGGTTCTTCACTGGCTTTGCTCCAACAGGTAAATCTATATTTCACAGCCATGTTGATTATTCAAATAGGTCAGAATTTGCACCACAACCTATTGAAATGTCACAGAAGACATTAACAAATGTCAATAGAAGTTGGATAGCTCCAACAGCAAGGTCTTTAGTACACAAGCAAAATACAAAATTACATGTAAAAATAGTGCCCCAGTTGAAGCCTAGAAGACTTATAATCATTGTAACTCCAACAAGCACAAAACATCCTTTCCAAACAGTGATTTTGACAAGGTTGGCAAACACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGGGCAAACAGATTCCACGGAACTTTGGAAGATGCTTAGGAAGACTGGCATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCACGGACTTGGAAGCTGAATTGAATCACCAGAGAAATCTTGCACTCAAGCATATTGTGCATCACAGGCTAAGTGGGATAGTACACTTTGCTGAGCTTTCCAATGTTTATGATCTTGAATTCTTCCAACAACTAAGACATATTGAGGTATTTGGAACGTGGCCAACAGCATTGTTAGCAGCAAACATGAAGAAAGTGATCATAGAAGGACCTGTGTGTGATTCTTCACAAGTCATAGGATGGCATTTAAGGAATATGAACAATGAAACTGATACAATTACTCCTCCAATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTCTCTGGGACCCGGAGAGATGGGGTCGCACTTCCTCTCTTCAAGACACCTCTCAGAATTCAATCAAATTCGTGAAGGAAGTAGTTCTAGAGGATGAAGCAAAGTTGAAGGGAATTCCCCCAGAGGACTGCTCCAGAATCTTGCTTTGGCGCTTCAATTTTCATGCTCGCACGACTTCAAATCATAAATTTCTGACTACTACATCTGGTGTTATCCGAAAATAA 1044 0.3966 MGSLERSRKKVMLWKKAMVHFSLCFVMGFFTGFAPTGKSIFHSHVDYSNRSEFAPQPIEMSQKTLTNVNRSWIAPTARSLVHKQNTKLHVKIVPQLKPRRLIIIVTPTSTKHPFQTVILTRLANTIKLVPQPLLWIVVEGQTDSTELWKMLRKTGIMYRHLVSKENFTDLEAELNHQRNLALKHIVHHRLSGIVHFAELSNVYDLEFFQQLRHIEVFGTWPTALLAANMKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSLQDTSQNSIKFVKEVVLEDEAKLKGIPPEDCSRILLWRFNFHARTTSNHKFLTTTSGVIRK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0436 347 CDD GlcAT-I 100 327 IPR005027 GO:0015018|GO:0016020
Gso10g0436 347 Pfam Glycosyltransferase family 43 122 326 IPR005027 GO:0015018|GO:0016020
Gso10g0436 347 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9-RELATED 1 334 - -
Gso10g0436 347 SUPERFAMILY Nucleotide-diphospho-sugar transferases 100 340 IPR029044 -
Gso10g0436 347 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 1 334 IPR005027 GO:0015018|GO:0016020
Gso10g0436 347 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 100 345 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0436 Gso-Chr10 4634384 4636926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0436 1 331 Glycosyltransferase AT2G37090 59.490 5.18e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0436 K20869 - gmx:100803434 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1489 19 43734910 43737660 Gso10g0436 10 4634384 4636926 PCT
Gso3g1503 3 40935467 40939367 Gso10g0436 10 4634384 4636926 PCT
Gso10g0436 10 4634384 4636926 Gso19g1489 19 43734910 43737660 PCT
Gso10g0436 10 4634384 4636926 Gso3g1503 3 40935467 40939367 PCT