Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1466 ATGAAAGGCATAGACATCTTCTGTGCATCACAGGCCTCAACAGCCATATGTCTTGGCATGGATCAACCCTCTTCTTCATCTTCCATTTCCATTTCCAACACTGCTCAATTTGGTGGCAGAGCAATTGACCGCCACAACCCCATCATCACAGATCCTAGAAGAACCCCCTCAAGAGACCTCATTTCCCCTTGCTCTTCTTCTCTGTCCCCCATTGACCCCAAACCTTTGCATGATCATCTCCAAAAGGCCAAGAAAAACTCCACTTCCAAGCCAAGTGGCCAGAAGAAGAAGAATGCTTCAAAGGGTCATGATCAGAAGAAGAAAAGTGCTGCTGGAAAGTTGACTGAACACATCACTAACAATTACTCCTCAAAACCAATTGATAGCATTCTGAGGAGGAGTTGGGCTAGACCACCTTCTGATTTGATCACTCCTCCTGGCTCTTCAAGATATTTGCTCGGTGATACGCCTTCGTTTGATTGTGTGTCGTCGGTCTATGATCCTGTTTTGGCTTTAACTAATGTTGAGAAGGAGAAAGCTCAAGTTATTCATCATGATGAAACCAACCATTCATCTAAACCCTCTAGCTCAACTCTTCCAAAGACTGATTCCTCAGACCAGGTTGTAGAATTGAGGGTTTCTCTGCACTGCAAAGGTTGTGAAGGAAAGGTTAGGAAACATCTCTCAAGAATGCGTGGAGTTAGGTCCTTCAACATAGACTTTGCGGCAAAGAAGGTTACAGTAGTTGGTGACGTCACTCCTTTGAGCGTATTGGCAAGCATATCAAAGGTGAAGAATGCACAATTTTGGCCAGAACATGCTTCAGTAATTGGATCTGCTACCCCAGAAACAAAGAGAACAAATTTTATCTAA 873 0.4387 MKGIDIFCASQASTAICLGMDQPSSSSSISISNTAQFGGRAIDRHNPIITDPRRTPSRDLISPCSSSLSPIDPKPLHDHLQKAKKNSTSKPSGQKKKNASKGHDQKKKSAAGKLTEHITNNYSSKPIDSILRRSWARPPSDLITPPGSSRYLLGDTPSFDCVSSVYDPVLALTNVEKEKAQVIHHDETNHSSKPSSSTLPKTDSSDQVVELRVSLHCKGCEGKVRKHLSRMRGVRSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQFWPEHASVIGSATPETKRTNFI* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1466 290 Gene3D - 204 268 - -
Gso3g1466 290 MobiDBLite consensus disorder prediction 183 205 - -
Gso3g1466 290 PANTHER COPPER CHAPERONE 1 287 - -
Gso3g1466 290 SUPERFAMILY HMA, heavy metal-associated domain 207 264 IPR036163 GO:0046872
Gso3g1466 290 MobiDBLite consensus disorder prediction 23 119 - -
Gso3g1466 290 MobiDBLite consensus disorder prediction 23 39 - -
Gso3g1466 290 CDD HMA 210 263 IPR006121 GO:0046872
Gso3g1466 290 Pfam Heavy-metal-associated domain 211 263 IPR006121 GO:0046872
Gso3g1466 290 ProSiteProfiles Heavy-metal-associated domain profile. 214 264 IPR006121 GO:0046872
Gso3g1466 290 PANTHER OS08G0405700 PROTEIN 1 287 IPR044526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1466 Gso-Chr3 40641980 40644305 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1466 - - gmx:100810015 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1454 19 43411702 43414019 Gso3g1466 3 40641980 40644305 GST
Gso3g1466 3 40641980 40644305 Gso10g0397 10 4207980 4209632 PCT
Gso10g0397 10 4207980 4209632 Gso3g1466 3 40641980 40644305 PCT