Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0397 ATGAAACGCATAGACATGTTCTGTGCTTCTCAAGCCTCAACAGCCATATGTCTGAGCATGGAACAAGCCTCATGCTCCTCTTCCAACAGCATTCTACTAGGAGGCCGAACCATGGACCGCCACAACCCCATTATCAATGACTCAAGAAGGAGCACTTCCAAATCCCTCACTGCTCCATGTTCCTCTTCTCAGTCCCCCATCAACCCCAAGCCTTACCATGAGCTCCACAAGGCCAAGAAAAACTCTTCTTCAAAAAATGCAGCAAAGGGTCATGATAATCATCATCAGAAGAAAAGTACAGCAGAAAAACTCACTGAACATGTCACCAACACTTCTAAACCAGTTGATGGCATTGTTCGTAGGGGTTGGCTTAAACCACCTGCTAATTTAATCACTCCTCCTGGTTCAACTAGATCTTTGCTCAGTGACACTGCCTTATTGGATGGTTCGTCAGATTTTGATCCAGTTTTGGCTTTAACTACTACGGTTAATAACAAAACTTCTCAAGTTGGTCATCAAGATGAAGCTAATCCTGTTTCGAAACTTTCAAGCTCTTCTCATCCAAAATCTGGTTCCTCAGACCAGGTTGTAGTATTGAGGGTATCTTTGCATTGCAAAGGCTGTGAAGGGAAGGTGAGGAAACACCTCTCTAGAATGCAAGGAGTTACTTCCTTCAACATAGATTTTGCGGCGAAGAAGGTGACAGTGGTTGGGGATGTGACTCCATTGAGTGTCTTGGCTAGCATATCAAAGGTGAAAAATGCACAGTTATGGCCAGCATCTGCCTCAGCAGTGGGATCTGGTACGGTTGAAACAAAGAGAAAAACTTTATCTAATTAA 840 0.4381 MKRIDMFCASQASTAICLSMEQASCSSSNSILLGGRTMDRHNPIINDSRRSTSKSLTAPCSSSQSPINPKPYHELHKAKKNSSSKNAAKGHDNHHQKKSTAEKLTEHVTNTSKPVDGIVRRGWLKPPANLITPPGSTRSLLSDTALLDGSSDFDPVLALTTTVNNKTSQVGHQDEANPVSKLSSSSHPKSGSSDQVVVLRVSLHCKGCEGKVRKHLSRMQGVTSFNIDFAAKKVTVVGDVTPLSVLASISKVKNAQLWPASASAVGSGTVETKRKTLSN* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0397 279 MobiDBLite consensus disorder prediction 48 69 - -
Gso10g0397 279 MobiDBLite consensus disorder prediction 72 104 - -
Gso10g0397 279 MobiDBLite consensus disorder prediction 165 194 - -
Gso10g0397 279 Pfam Heavy-metal-associated domain 199 251 IPR006121 GO:0046872
Gso10g0397 279 ProSiteProfiles Heavy-metal-associated domain profile. 195 252 IPR006121 GO:0046872
Gso10g0397 279 SUPERFAMILY HMA, heavy metal-associated domain 195 252 IPR036163 GO:0046872
Gso10g0397 279 Gene3D - 193 256 - -
Gso10g0397 279 CDD HMA 198 251 IPR006121 GO:0046872
Gso10g0397 279 MobiDBLite consensus disorder prediction 36 119 - -
Gso10g0397 279 PANTHER OS08G0405700 PROTEIN 1 274 IPR044526 -
Gso10g0397 279 PANTHER COPPER CHAPERONE 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0397 Gso-Chr10 4207980 4209632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0397 - - gmx:100797952 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1454 19 43411702 43414019 Gso10g0397 10 4207980 4209632 PCT
Gso3g1466 3 40641980 40644305 Gso10g0397 10 4207980 4209632 PCT
Gso10g0397 10 4207980 4209632 Gso19g1454 19 43411702 43414019 PCT
Gso10g0397 10 4207980 4209632 Gso3g1466 3 40641980 40644305 PCT