Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1432 ATGGAGGAAGCTCTGGAACTGTCACGCGCCAAGGACACGAAGGAGAGGATGGCGGGCGTAGAGCGGCTGCATCAACTTCTAGAAGTTTCCAGAAAGAGCCTCTCCTCTTCCGAAGTCACCTCGCTCGTCGACACATGTATGGATCTCCTCAAGGACAACAACTTCCGCGTCTCCCAGGGCGCTCTCCAGGCCCTCGCCTCCGCCGCCGTCCTCGCCGGTGAACACTTCAAGCTCCACTTCAACGCCCTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCCCGTCGGCTCCTGCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTCAGAGAGGAGTTTACACGAACTGTCGCAGCTGCAATTAATCTATTTGCAGCTACTGAGCTTCCACTTCAACGAGCTATCCTCCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGACCTCAATTTCGTGACGAACTTCACCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTCGAGGGAATTCAACCAAAAGTTCGCTCTTCGGATGGTCCAGGTGGATATATTACTGGGGAAATTAAACATGCAAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCGTAGACCCTGTCAAGGTATATTCAGATAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAACTGCTGCTCTGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTGTGGATTATCCATGTTTTCGTGGGCTCCTGAAGCAACTTGTTGGACCTTTAAGCACACAATTGTCAGACCGAAGATCTACCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTTATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCCGATTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTTATTTGGTCCTAGAACATTGGCCTGATGCACCTGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGCGATTCAACGGTTAATAAATGAAGAGGATGGAGGAATACATCGACGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACCGACGTCATTATCTAGCCAGGCCTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCTATGGATAAAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAACAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCAGCTGTCCCCGCATCTAATCATCTGACAAGCTCTTTAACAACAGAATCAACTACTTCCGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTCGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCTGCCAAGTTATCCTATCGTAGTAATGTTGGTATTGAGCCTTTATCATCATATTCGAGTAAAAGGGCATCTGAAAGACAAGAAAGAAGTTCTCTCGATGATAACCATGATATGAGGGAGACTAGGCGATATATGAACCCCAACACTGATAGACAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCTCATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTGGCAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGTCGAATTTTGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCCGATTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCGAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGCATGCCGAAAGCCTTTTGAGGGTTATATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGGCAGCCGTGTTCAACAACTCTGGAAGTGGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCTATGAACCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTAACCCCTTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACATGCATTATATCAGTGTACTCTCACTTTGATTCAACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAGAACAAGAAAGAGAAACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAAGCTCATTACCTTGGTAGGTATTCTGCTGGTTCACTTGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATAAAAGCCAGTCTTGGTCAAGCATCTTCTGGTGAAACTCGGGAACATCTGTATCATAATTTTGAGACTGATCCTAATAGTGGCAGCCTTGGTTCAAAAACTAAGGATCTTGCTTATGCCGTCAATCCAATGGGTCAAAACTTTGGCTCTCAAACTAGCCAACATGGACACATGGACAGTAGCGTGAGCTTAGAGGGTCTTTCAACTCCTCGTCTAGATGTAAACGGTTTGATGTCATCAGAGCATTTAAATGGTGCTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGAATTGGAACTTAATCATCACTCAGCTGAAGATGTAAAAATTAACACCATGACACACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTCAACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGTGCCATGGAGAACTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTCTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTGCTGGTTACCGAGGATGAGAAAACACTCGTTATTTGCATAAATTGCTTAACAAAGCTTGTGGGGCGGCTTTCTCAGGAAGAACTAATGGCTCAGTTACCCTCGTTTCTGCCTGCCCTTTTCGAAGCTTTTGGTAACCAGAGTGCAGATGTTCGGAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAGAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAGCGATTGATGCCGTTCAAGACTAG 4323 0.4372 MEEALELSRAKDTKERMAGVERLHQLLEVSRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLAGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVAAAINLFAATELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGPGGYITGEIKHASVNPKKSSPKAKSSSRENSLFGGEGDITEKPVDPVKVYSDKELIREFEKIASTLVPEKDWSIRTAALQRVEGLVLGGAVDYPCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAYLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGIHRRHASPSIRDRGAPTSLSSQASAPSNLPGYGTSAIVAMDKSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRSNVGIEPLSSYSSKRASERQERSSLDDNHDMRETRRYMNPNTDRQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSAGRRSFDDNQLSLGEMSNFADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVHDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKEKQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGRYSAGSLDSDGGRKWSSQDSTLIKASLGQASSGETREHLYHNFETDPNSGSLGSKTKDLAYAVNPMGQNFGSQTSQHGHMDSSVSLEGLSTPRLDVNGLMSSEHLNGAEGYVNDKEHPSELELNHHSAEDVKINTMTHTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAMENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGRAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVQD* 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1432 1440 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 691 719 - -
Gso3g1432 1440 Pfam CLASP N terminal 283 499 IPR024395 -
Gso3g1432 1440 Pfam CLASP N terminal 797 991 IPR024395 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 697 719 - -
Gso3g1432 1440 SMART TOG_3 269 513 IPR034085 -
Gso3g1432 1440 SMART TOG_3 1193 1432 IPR034085 -
Gso3g1432 1440 SMART TOG_3 3 224 IPR034085 -
Gso3g1432 1440 SMART TOG_3 775 1024 IPR034085 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 601 618 - -
Gso3g1432 1440 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Gso3g1432 1440 MobiDBLite consensus disorder prediction 601 660 - -
Gso3g1432 1440 SUPERFAMILY ARM repeat 7 401 IPR016024 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 218 266 - -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 518 532 - -
Gso3g1432 1440 Gene3D - 791 1015 IPR011989 -
Gso3g1432 1440 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Gso3g1432 1440 PANTHER PROTEIN, PUTATIVE-RELATED 28 1432 - -
Gso3g1432 1440 Gene3D - 1223 1432 IPR011989 -
Gso3g1432 1440 Gene3D - 1 221 IPR011989 -
Gso3g1432 1440 Gene3D - 266 505 IPR011989 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 245 260 - -
Gso3g1432 1440 PANTHER CLASP 28 1432 - -
Gso3g1432 1440 SUPERFAMILY ARM repeat 288 1430 IPR016024 -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 634 660 - -
Gso3g1432 1440 MobiDBLite consensus disorder prediction 502 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1432 Gso-Chr3 40327109 40343664 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1432 K16578 - gmx:100796697 2779.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1423 19 43157045 43168659 Gso3g1432 3 40327109 40343664 GST
Gso3g1432 3 40327109 40343664 Gso10g0368 10 3899278 3921027 PCT
Gso10g0368 10 3899278 3921027 Gso3g1432 3 40327109 40343664 PCT