Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1423 ATGGAGGAAGCGCTGGAACTGTCACGCGCCAAGGACACGAAGGAGAGGATGGCGGGCGTGGAGCGCCTCCACCAACTTCTAGAAGCTTCCAGAAAGAGCCTATCCTCTTCCGAGGTCACCTCGCTCGTCGATACGTGTATGGATCTCCTCAAGGACAACAACTTCCGCGTCTCCCAGGGCGCGCTCCAGGCCCTCGCCTCCGCCGCCGTCCTCGCCGGCGAACACTTCAAGCTCCACTTCAACGCCCTCCTCCCCGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCGCGCCGCCTCCTCCTCACTCTCATGGAGGTTTCTTCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGGCACATAAAAGCTGGAGAGTTAGAGAAGAGTTTACACGAACTGTCACGGCTGCAATTAATCTATTTGCATCTACTGAGCTTCCACTCCAACGGGCTATCCTCCCCCCTGTTTTGCATTTGCTTAATGATCCAAATCCTGCTGTAAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATACACAAGCTGGACCTCAATTTCGTGACGAACTTCATCGCCACAATCTTCCTTCATCTTTGGTGAAAGATATTAATGCCAGGCTTGAGGGAATCCAACCAAAAGTTCGCTCTTCCGATGGCATTCCAGGTGGATATATTACTGGGGAAATTAAACATGTAAGTGTTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCCTCAAGGGAGAACTCTCTTTTTGGAGGAGAAGGTGACATCACTGAGAAACCCATAGACCCTGTCAAGGTATATTCAGATAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTGCCTGAAAAAGACTGGTCAATTCGAATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTCTTGGAGGTGCTGTGGATTATCCATGTTTTTGTGGGCTCCTGAAGCAACTTGTTGGACCTTTAACCACACAATTGTCAGACCGAAGATCTACCATTGTGAAGCAGGCTTGCCATCTATTGTGCTTTTTGTCAAAGGAACTCTTGGGTGATTTTGAGGCATGTGCTGAAATGTTGATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTGCGCAACTGCAAAGTTGCTCGTGTGCTTCCCCGTATAGCCGATTGTGCAAAAAATGATCGCAATGCAGTACTTCGTGCAAGGTGTTGTGAATATGCTTATTTGGTCCTAGAACATTGGCCTGATGCACCAGAAATACATCGATCAGCTGATTTATATGAGGATCTGATAAAGTGTTGTGTTTCAGACGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCCAAAACTTGGCCTGAGCGTTCTCGTCGCCTATTTTCATCCTTTGACCCTGCTATTCAACGGTTAATAAATGAAGAGGATGGGGGAATGCATCGGCGACATGCTTCACCTTCCATTCGAGATAGAGGTGCACTGATGTCATTATCTAGCCAGGCCTCTGCTCCCTCTAATCTACCTGGTTATGGAACTTCTGCTATTGTTGCGATGGATAGAAGTTCAAGTATATCATCAGGGACATCTATCTCATCTGGCATACTTCTTTCACAAGCTAAGTCACTTGGTAAGGGTACAGAACGTAGTTTGGAAAGCATGTTACATGCAAGCAAACAGAAGGTTTCTGCTATTGAAAGCATGCTTAGAGGCTTGGATTTGTCTGATAAGCATAATTCATCTTCTCTCCGGTCAACAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCTTTCCCTGCTGCTGTCCCCGCATCTAATCATCTGACAAGCTCTTTAACAGAATCAACTACTTCTGGCATCAATAAAGGTAGTAACCGAAATGGTGGTCTTGGTTTGTCTGACATAATCACTCAGATTCAAGCTTCGAAAGATTCGGCCAAGTTATCCTATCGTAGCAATGTTGGTATCGAGCCTTTATCATCATTATCATCATATTCGAGTAAAAGGGCATCTGACAGACAAGAAAGAAGTTCTCTTGATGATAACAATGATATGAGGGAGACTAGGCGATATATGAACCCCAACACTGATAGGCAGTATTTGGATGCCCCTTATAGAGATGGAAACTTTAGGGAATCTCATAATAGTTATGTGCCTAATTTCCAGAGACCACTATTGAGAAAGAATGTGGCTGGACGCATGTCTGCTAGCAGGAGGAGGAGTTTTGATGATAATCAGCTATCTCTTGGAGAGATGTCAAATTTTGCAGATGGACCAGCATCTCTTCATGAAGCTTTGAGTGAAGGACTTAGTTCAGGTTCCAATTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCATTCTTTGTTGCAGCAAGGTCCAAAGGGAACTCTAGAAGTTGTTCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTGTTCCAGTATGCCGAAAGCCATTTGAGGGTTACATGGAAAGAATATTACCCCATGTGTTTTCTCGGTTAATTGACCCTAAAGAACTTGTCAGGCAGCCATGTTCAACAACTCTGGAAGTTGTCAGCAAAACTTACAGTATAGATTCTCTCTTACCTGCATTATTACGCTCACTAGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAATTTGCTATCAATTCCTTTAACAAACATGCTATGAATCCAGAAGGTGCTGCGAATATTGGCATCCTAAAATTATGGCTTGCTAAGTTAACCCCTTTGGTCAATGACAAAAATACAAAGCTTAAAGAAGCAGCTATTACCTGCATTATATCAGTGTACTCTCACTTTGATTCGACTGCTGTTCTTAATTTCATTCTGAGTTTGTCAGTTGAAGAACAAAATTCCTTGAGACGAGCATTGAAACAATACACCCCTCGCATTGAAGTAGACCTAATAAACTATCTGCAAAACAAGAAAGAGAAACAACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAACATCCTCTGAAGATGGATATGTTGGTTACTCTAGGAAAGCTCATTACCTTGGTAAGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCAACACTGATAAAAGCCAGTCTTGGTCAAGCATCTTCTGGTGAAACTCGGGAACATCTGTATCATAATTTTGAGACTGATCCTAACAGTGGTAGTCTTGGTTCAAAAACTAAGGATCTTGCTTATGCAGTCAATCCGATGGGTCAAAACATTGGCTCTCAAACTAGCCAACATGGACATGTGGACAGTAGCGTGAGCTTAGAGGGTCTTTCCATTCCTCGTCTAGATGTAAACGGTTTGATGCCATCAGAGCATTTAAATGGTACTGAAGGCTATGTAAATGACAAAGAGCATCCTTCTGAATTGGAACGTAATCATCACTCAGCTGAAGATGTAAAGATTAACTCTATGACAGACACAGGACCCAGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAACGGACTGCTCTTCAACAATTGGTTGAAGCTTCTATAACAAATGATCATTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACAGTAGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAGTCAAAGAGCTTGCTCTTTCACTGATAGTTGAAATGCTTAAAAACCAGAAAGGTGCCGTGGAGAATTCTGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACAAAAGATATCATTCCTAAGGTCTCGAATGAAGCAGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTCATTGTCCCTCTACTGGTTACTGAGGATGAGAAAACGCTCGTTATTTGCATAAATTGCTTAACAAAGCTTGTGGGGCGGCTTTCTCAGGAGGAACTGATGACTCAGTTACCCTCGTTTCTGCCTGCTCTTTTCGAAGCTTTTGGTAACCAGAGTACAGATGTTCGGAAGACCGTTGTTTTCTGTCTCGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCACAAGCCAGGACAGGCAAAGCAATTGATGCCGTTCAAGACTAG 4335 0.436 MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQGALQALASAAVLAGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAILCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHVSVNPKKSSPKAKSSSRENSLFGGEGDITEKPIDPVKVYSDKELIREFEKIASTLVPEKDWSIRIAAMQRVEGLVLGGAVDYPCFCGLLKQLVGPLTTQLSDRRSTIVKQACHLLCFLSKELLGDFEACAEMLIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRNAVLRARCCEYAYLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSIRDRGALMSLSSQASAPSNLPGYGTSAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLDLSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTESTTSGINKGSNRNGGLGLSDIITQIQASKDSAKLSYRSNVGIEPLSSLSSYSSKRASDRQERSSLDDNNDMRETRRYMNPNTDRQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSASRRRSFDDNQLSLGEMSNFADGPASLHEALSEGLSSGSNWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIVPVCRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKLWLAKLTPLVNDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTPRIEVDLINYLQNKKEKQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGKYSAGSLDGDGGRKWSSQDSTLIKASLGQASSGETREHLYHNFETDPNSGSLGSKTKDLAYAVNPMGQNIGSQTSQHGHVDSSVSLEGLSIPRLDVNGLMPSEHLNGTEGYVNDKEHPSELERNHHSAEDVKINSMTDTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVVLEVLDDSDSSVKELALSLIVEMLKNQKGAVENSVEIVIEKLLHVTKDIIPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMTQLPSFLPALFEAFGNQSTDVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAIDAVQD* 1445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1423 1444 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Gso19g1423 1444 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
Gso19g1423 1444 Pfam CLASP N terminal 284 500 IPR024395 -
Gso19g1423 1444 Pfam CLASP N terminal 801 995 IPR024395 -
Gso19g1423 1444 SMART TOG_3 270 514 IPR034085 -
Gso19g1423 1444 SMART TOG_3 779 1028 IPR034085 -
Gso19g1423 1444 SMART TOG_3 1200 1436 IPR034085 -
Gso19g1423 1444 SMART TOG_3 3 224 IPR034085 -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 602 659 - -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 700 724 - -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 243 267 - -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 602 619 - -
Gso19g1423 1444 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 693 732 - -
Gso19g1423 1444 PANTHER CLASP 28 1436 - -
Gso19g1423 1444 Gene3D - 795 1019 IPR011989 -
Gso19g1423 1444 SUPERFAMILY ARM repeat 7 402 IPR016024 -
Gso19g1423 1444 SUPERFAMILY ARM repeat 290 1434 IPR016024 -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 635 659 - -
Gso19g1423 1444 Gene3D - 1227 1436 IPR011989 -
Gso19g1423 1444 Gene3D - 1 221 IPR011989 -
Gso19g1423 1444 MobiDBLite consensus disorder prediction 246 261 - -
Gso19g1423 1444 PANTHER PROTEIN, PUTATIVE-RELATED 28 1436 - -
Gso19g1423 1444 Gene3D - 267 507 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1423 Gso-Chr19 43157045 43168659 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1423 K16578 - gmx:100820523 2762.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1423 19 43157045 43168659 Gso3g1432 3 40327109 40343664 GST
Gso19g1423 19 43157045 43168659 Gso10g0368 10 3899278 3921027 PCT
Gso10g0368 10 3899278 3921027 Gso19g1423 19 43157045 43168659 PCT