Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0368 ATGGAGGAAGCGCTCGAGCTCGCACGCGCGAAGGACGCGAAGGAGCGCATGGCGGGCGTGGAGCGCCTCCACGAGGTGCTGGAAGCTTCCAGAAGGAGCCTCAGCTCCGGTGAGGTCACTTCTCTCGTCGATTGCTGCTTGGATCTCTTGAAGGACAGCAGCTTCAAGGTCTCGCAGGGCGCGCTCCAGGCTCTCGACTCCGCCGCCGTGCGCGCCGGTGACCACTTCAAGCTCCACTTCAACGCGCTGGTCCCTGCCGTCGTCGACCGCCTCGGCGACGCCAAGCAGCCCGTCCGCGACGCCGCCAGGCGGCTCCTTCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACAAGCAGAAGCTGGAGAGTCAGAGAGGAATTTGCACGAACAGTCACATCTGCAATTGGTCTATTTTCATCTACTGAGCTTCCCCTTCAACGTGCTATTCTTCCTCCTATTTTGCAGTTGCTGAATGATCTGAATCCTGCTGTTAGGGAAGCAGCTATTTTGTGTATTGAGGAAATGTATACACAAGCTGGGTCCCAATTTCGTGATGAACTTCAGCGCCACAATCTCCCTTCATCTTTGGTGAAAGCTATTAATGCTAGGCTAGAGGGAATTCAACCAAATGTTTGCTCTTCAGATGGTATTTCTAGCGGTTATAATGCTGGGGAAATTAAGCCTGTGGGTGTTAATCCCAAGAAAAGTAGTCCAAAGCATAAAAGTTCATCAAGGGAGACCTCTCTTTTTGGAGGAGAAGGTGATGCCACAGAGAAACTCATAGACCCCATCAAGGTGTATTCAGAGAAGGAGTTAATCAGAGAAATTGATAAGATTGCTTCTACCCTTGTACCAGAAAAGGACTGGTCAATTCGTATTGCTGCCATGCAAAGAATTGAAGGTCTTGTTTTGGGAGGTGCTGCTGATTATCCATGTTTCTTTGGACTCCTGAAGCAGCTTGTTGGACCTTTAAGCACACAATTGTCAGATCGAAGGTCAAGCATTGTGAAGCAGGCTTGCCATCTATTATGCTTTTTGTCGAAGGACTTCTTGGGTGATTTTGAAGCATGTGCTGAATTGTTCATACCAGTCCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAATCTGCGGACAACTGCATAAAAATGATGTTGCACAACTGCAAAGTAGCTCGTGTGCTTCCTCGGATAGCTGATTGTGCCAAAAATGATCGTAATGCTGTTCTACGTGCAAGGTGTTGTGATTATGCTCTTTTGATATTAGAACATTGGCCTGATGCAGCAGAAGTACAACGATCGGCTGATCTATATGAGGATATGATAAGGTGCTGTGTTTCAGATGCAATGAGTGAGGTGCGGTCGACTGCAAGGATGTGTTACAGAATGTTTGCAAAGACTTGGCCAGAACGTTCCCGTCGCCTGTTTTCATCATTTGACCCTGCTATTCAAAGGTTAATCAACGAAGAGGATGGAGGAATGCATAGGCGACATGCATCACCTTCTGTTTGTGATAGAGGTGCACTGATGTCAATAACTACTCAAGCTTCAGCACCCTCTAATCTAACTGGTTATGGAACTTCTGCTATTGTTGCAATGGACCGAAGTTCAAGTTTATCATCGGGGACTTCTATCGCCTCTGGTGTTCTTTCACAAGCCAAGTCACTTGGTAAAGGTACTGAACGTAGTTTGGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGGGGTTTGGATTTGTTTGATAAACATGGTTCATCTGCTCTCCGGTCATCGAGCTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCACCATTCCCTGCTGCTGTCACAGCATCTAATCATCTAACTAGCTCTTTAACGACAGAATCAACTGCATCTGGTGCCAATAAAGCTAGTAACCGAAATGGTGGTTTGGGTATGTCTGACATAATCACCCAAATTCAAGCTTCCAAAGATTCTGGCAGGTTATCGTATAATACTAATGTTGGTATTGAGCCTTTATCAACGTTCTCATCATACTCAAGTAAAAGGGTTACTGAAAAGTTGCAAGAGAGAGGTTCTATTGATGAAAACAGTGACATGAGGGAGACTAGATGCTATATGAATCCCAACATAGATAGGCAGTGTATGGATACCCATTATAGAGATGGCAACTATAGGGATTCACAGCATAGTTATGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGTGTGACTACTGGCAGCAGGAGGAGTTTTGATGATAGCCAATTATCTCTTGGAGAGAAGTCAAACTATGTAGATGGCCCAGCATCTCTTCATGAAGCTCTGAGTGAAGGACTTAGCTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCCTTTAATTATCTTCACTCTTTATTGCAGCAAGGCCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTTCAGCACTTGGATGATCCCCATCATAAAGTTGCACAGGCTGCTCTCTCCACACTTGGAGATATTATTCTGGCATTCCGAAAGCCCTTTGAAGGTTACATGGAACGAATGTTACCCCATGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTAGTTAGGCAAGCATGCTCAATGAATTTGGAAGTTGTTAGCAAAACATACAGCATAGATTCTCTCCTACCTGCATTGCTACGATCACTAGATGAACAAAGGTCACCAAAGGCAAAATTGGCTGTTATTGAGTTTGCAATAAGTTCGTTTAATAAGCATGCAATGAATCCAGAAGGTGCTGCTAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGTCCCATTGGTTCATGATAAAAATACAAAACTTAAAGAAGCAGCTATTACATGCATTATATCAGTATACTCTCACTTTGATTCATCTGCAGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAGCAGCGCACCCCTCGCATTGAAGTAGACTTGATGAATTATCTGCAAAACAAGAAAGAGCGACGTTCTAAGTCTTCCTATGATCCATCTGATGTTGTGGGAGCATCCTCTGAAGAGGGATATGTTGGTTTGTCAAGGAAAGCTCATTATATTGGAAGATATTCTGCTGGTTCACTAGATAGTGATGGTAGCAGGAAGTGGAGTTCCCAAGATTCTGCCCTGATTAAAGGCAGTATTGGCCAAGCAGTTTCTGATGAAACTGAAGAACACACTGATTCTAATAGTGGTGTTTATGGTTTCAAAACTAAAGATCTTGCTTACACAGCCAATTCAATGGGTCAAAACTTTGGCTTACAAACTAGCCACAGACATGTGAACAGTAGCATGAATTTTGAAGGTCTATCATCTGATCTGGATGTTAATGGTCTGATGTCATCAGAACATTTAAATATTACTGAAGACTTTGGACCCGACAAAGAACATCCTTCGGAATTGAACCATAATCATCAGTCAGCTGAAGATGTGAACGTAAACTACATGACAGACACTGGACCCAGTATTCCCCAGATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGCAGACTGCACTTCAACAGCTAGTTGAAGTGTCTATAGCCAATGAACATTCTATTTGGACTCTGTACTTCAATCAGATTTTGACAGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCATGCTCTATCTCTGATAGTTGAAATGCTTAAAAATCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTTGTTGAAAAGCTGCTTAATGTTACAAAGGATATTGTTCCCAAGGTCTCAAATGAAGCAGAGCACTGCCTCACCATTGTTTTATCTCAGAATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTCTACTGGTTACCGAGGATGAGAAAACTCTTGTTACTTGCATAAATTGCTTGACAAAGCTTGTGGGGAGGCTCTCTCAGGAGGAAGTGATGGCTCAGTTACCTTCTTTCCTGCCTGCTTTGTTTGAAGCTTTTGGAAACCAGAGTGCTGATGTTCGCAAGACCGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTTTTGCCATATTTGGAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTACGCAAATCGTATCTCACAGGCAAGGACAAGAAAATCAATTGATACCACACACGATTAG 4311 0.4342 MEEALELARAKDAKERMAGVERLHEVLEASRRSLSSGEVTSLVDCCLDLLKDSSFKVSQGALQALDSAAVRAGDHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTSRSWRVREEFARTVTSAIGLFSSTELPLQRAILPPILQLLNDLNPAVREAAILCIEEMYTQAGSQFRDELQRHNLPSSLVKAINARLEGIQPNVCSSDGISSGYNAGEIKPVGVNPKKSSPKHKSSSRETSLFGGEGDATEKLIDPIKVYSEKELIREIDKIASTLVPEKDWSIRIAAMQRIEGLVLGGAADYPCFFGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKDFLGDFEACAELFIPVLLKLVVITVLVIAESADNCIKMMLHNCKVARVLPRIADCAKNDRNAVLRARCCDYALLILEHWPDAAEVQRSADLYEDMIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSVCDRGALMSITTQASAPSNLTGYGTSAIVAMDRSSSLSSGTSIASGVLSQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLFDKHGSSALRSSSLDLGVDPPSSRDPPFPAAVTASNHLTSSLTTESTASGANKASNRNGGLGMSDIITQIQASKDSGRLSYNTNVGIEPLSTFSSYSSKRVTEKLQERGSIDENSDMRETRCYMNPNIDRQCMDTHYRDGNYRDSQHSYVPNFQRPLLRKNVAGRVTTGSRRSFDDSQLSLGEKSNYVDGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLGDIILAFRKPFEGYMERMLPHVFSRLIDPKELVRQACSMNLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLVPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDPSDVVGASSEEGYVGLSRKAHYIGRYSAGSLDSDGSRKWSSQDSALIKGSIGQAVSDETEEHTDSNSGVYGFKTKDLAYTANSMGQNFGLQTSHRHVNSSMNFEGLSSDLDVNGLMSSEHLNITEDFGPDKEHPSELNHNHQSAEDVNVNYMTDTGPSIPQILHMICSGGDGSPISSKQTALQQLVEVSIANEHSIWTLYFNQILTVVLEVLDDSDSSIREHALSLIVEMLKNQKDAMENSVEIVVEKLLNVTKDIVPKVSNEAEHCLTIVLSQNDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEEVMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSTQLKLVTIYANRISQARTRKSIDTTHD* 1437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0368 1436 Coils Coil 1272 1292 - -
Gso10g0368 1436 Gene3D - 796 1020 IPR011989 -
Gso10g0368 1436 PANTHER CLASP 28 1428 - -
Gso10g0368 1436 MobiDBLite consensus disorder prediction 633 662 - -
Gso10g0368 1436 Gene3D - 1 220 IPR011989 -
Gso10g0368 1436 Gene3D - 1219 1430 IPR011989 -
Gso10g0368 1436 SUPERFAMILY ARM repeat 288 1426 IPR016024 -
Gso10g0368 1436 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Gso10g0368 1436 Gene3D - 266 507 IPR011989 -
Gso10g0368 1436 MobiDBLite consensus disorder prediction 239 265 - -
Gso10g0368 1436 MobiDBLite consensus disorder prediction 612 662 - -
Gso10g0368 1436 PANTHER PROTEIN, PUTATIVE-RELATED 28 1428 - -
Gso10g0368 1436 SUPERFAMILY ARM repeat 2 402 IPR016024 -
Gso10g0368 1436 SMART TOG_3 1194 1428 IPR034085 -
Gso10g0368 1436 SMART TOG_3 3 224 IPR034085 -
Gso10g0368 1436 SMART TOG_3 270 514 IPR034085 -
Gso10g0368 1436 SMART TOG_3 780 1028 IPR034085 -
Gso10g0368 1436 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Gso10g0368 1436 Pfam Vacuolar 14 Fab1-binding region 1222 1309 - -
Gso10g0368 1436 Coils Coil 10 30 - -
Gso10g0368 1436 Pfam CLASP N terminal 285 500 IPR024395 -
Gso10g0368 1436 Pfam CLASP N terminal 802 996 IPR024395 -
Gso10g0368 1436 Pfam HEAT repeat 160 187 IPR000357 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0368 Gso-Chr10 3899278 3921027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0368 K16578 - gmx:100775793 2761.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1423 19 43157045 43168659 Gso10g0368 10 3899278 3921027 PCT
Gso3g1432 3 40327109 40343664 Gso10g0368 10 3899278 3921027 PCT
Gso10g0368 10 3899278 3921027 Gso19g1423 19 43157045 43168659 PCT
Gso10g0368 10 3899278 3921027 Gso3g1432 3 40327109 40343664 PCT