Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1404 ATGGGTATACTGAAATCAAAACACCACAAGTATACGCTCCTCTTTTTTCTTAGTATTTCGTTTCCTCTGTTTCTTCTTACACCTATTACTACCTCAGACAACACAAACTTGATCTACAAAGGTTGTGCCGACCAGAAGATGCAAGGCCAATACTCCCAGAACCTTAAACCGCTCTTGGATTCACTAGTGTCGGCGTCGGCGCAAAAGGGCTTCGCCGCGACTACACAAAACGCGCTCACGGGCGCGTACCAATGCAGAGGGGACCTCTCCAACTCCGAATGCTACAACTGCGTCAGCAAGATTCCAAACATGCTGGGGCGCCTCTGCGGCGGTGATGACGTGGCGGCGGCGCGGGTGCAGCTGAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGGTGGTCCCGGCCACGCAGCTGCTGTACAAGGTGTGCGGGGCCCGCAAGGTGGTCGACGGCGGAGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGCGGAGAACGGCGTGCAGAACAGCGGAAATTTGTTCTACACGGGGAGTTACCAGAGCCTCTATGTGTTGGGGCAGTGCGAGGGTAGTTTGGGAAATGCGGATTGTGGGGGTTGTATCAAGAGTGCTGCGGAACAGGCTGGGGATCAGTGTGCTGACTCCATCTCCGCGCAGGTTTATCTCCAGAGTTGTTTTCTTAGTTATAGCTTTTACCCCAATGGTGTTCCCACCTTGTCATCTTCCTCAGGGGGAGGAGGGGGGCATCCACACACGGAGAGGACAGTGGCACTTGCGGTGGGAGGGGTGGCGGCTCTGGGATTCTTGATTGTTTGTTTGTTATTTCTCAAGTCGGTGTTGAAGAGAAGAGGTGGGAAGCGTTGA 879 0.5529 MGILKSKHHKYTLLFFLSISFPLFLLTPITTSDNTNLIYKGCADQKMQGQYSQNLKPLLDSLVSASAQKGFAATTQNALTGAYQCRGDLSNSECYNCVSKIPNMLGRLCGGDDVAAARVQLSGCYLRYEVVGFKVVPATQLLYKVCGARKVVDGGGFEARRDAAFGMAENGVQNSGNLFYTGSYQSLYVLGQCEGSLGNADCGGCIKSAAEQAGDQCADSISAQVYLQSCFLSYSFYPNGVPTLSSSSGGGGGHPHTERTVALAVGGVAALGFLIVCLLFLKSVLKRRGGKR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1404 292 Pfam Salt stress response/antifungal 46 129 IPR002902 -
Gso3g1404 292 Pfam Salt stress response/antifungal 177 236 IPR002902 -
Gso3g1404 292 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 289 - -
Gso3g1404 292 ProSiteProfiles Gnk2-homologous domain profile. 33 133 IPR002902 -
Gso3g1404 292 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 11 289 - -
Gso3g1404 292 Gene3D - 138 238 IPR038408 -
Gso3g1404 292 Gene3D - 34 133 IPR038408 -
Gso3g1404 292 ProSiteProfiles Gnk2-homologous domain profile. 139 239 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1404 Gso-Chr3 39984087 39986452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1404 23 238 Receptor kinase-like Gene Family AT4G05200 27.311 1.29e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1404 - - gmx:100786830 563.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1397 19 42802098 42804366 Gso3g1404 3 39984087 39986452 GST
Gso3g1404 3 39984087 39986452 Gso10g1508 10 41558579 41561027 PCT
Gso10g1508 10 41558579 41561027 Gso3g1404 3 39984087 39986452 PCT