Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1397 ATGGGTATACTAAAAGTAAAACACCACATTCCCACGCTCCTCTTTCTCAGTATTTCATTTCCTCTGTTTCTTCTTACACCTACCTCCTCAGACAACACAAACTTGATCTACAAAGGTTGCGCCGACCAGAAACTCCAAGCCCAATACTCCCAGAACCTCAAACCGCTGTTGGACTCCCTAGTCTCGGCGTCGGCACAGAAGGGTTTCGCCGCGACTACCCAAAACGCGCTCACCGGCGCGTACCAATGCAGGGGAGACCTCTCCAACTCCGACTGCTACACCTGCGTGAGCAAGATTCCGGGGATGGTGAAGCGCCTCTGCGGCGGAGATGACGTGGCGGCGGCGCGGGTCCAGCTGAGCGGGTGCTACCTGCGGTACGAGGTGGTCGGGTTCAAGGTGGTCTCCGCGACGCAGCTGCTGTACAAGGTGTGCGGGGCCCGCAAGGTGGTCGACGGCGGGGGGTTCGAGGCGAGGAGGGACGCGGCGTTTGGGATGGCGGAGAACGGCGTGCAGAGCAGCGGAAATTTGTTCTACACGGGGAGCTACCAGAGTCTCTATGTGTTGGGACAGTGCGAGGGTAGTTTGGGAAATGAGGATTGTGGAGGTTGTATCAAGAGTGGTGCGGAACAGGCTAGGGATCAGTGTGGTGACTCTATCTCAGCGCAGGTTTATCTCCAGAGTTGTTTTCTTAGTTATAGCTTTTACCCCAATGGTGTTCCCACCGCCTCATCGTCTTCCTCAGGGGGAGGAGGGGGGCATCCACACACTGAGAGGACAGTGGCACTTGCGGTGGGAGGGGTGGCGGCTCTTGGATTCTTGATTGTTTGTTTGTTATTTCTCAAGTCGGTGTTGAAGAGAAGAGGTGGGAAGCGTTGA 876 0.5616 MGILKVKHHIPTLLFLSISFPLFLLTPTSSDNTNLIYKGCADQKLQAQYSQNLKPLLDSLVSASAQKGFAATTQNALTGAYQCRGDLSNSDCYTCVSKIPGMVKRLCGGDDVAAARVQLSGCYLRYEVVGFKVVSATQLLYKVCGARKVVDGGGFEARRDAAFGMAENGVQSSGNLFYTGSYQSLYVLGQCEGSLGNEDCGGCIKSGAEQARDQCGDSISAQVYLQSCFLSYSFYPNGVPTASSSSSGGGGGHPHTERTVALAVGGVAALGFLIVCLLFLKSVLKRRGGKR* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1397 291 Gene3D - 135 236 IPR038408 -
Gso19g1397 291 Gene3D - 32 131 IPR038408 -
Gso19g1397 291 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 288 - -
Gso19g1397 291 PANTHER PLASMODESMATA-LOCATED PROTEIN 1 11 288 - -
Gso19g1397 291 ProSiteProfiles Gnk2-homologous domain profile. 137 237 IPR002902 -
Gso19g1397 291 ProSiteProfiles Gnk2-homologous domain profile. 31 131 IPR002902 -
Gso19g1397 291 Pfam Salt stress response/antifungal 44 127 IPR002902 -
Gso19g1397 291 Pfam Salt stress response/antifungal 175 234 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1397 Gso-Chr19 42802098 42804366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1397 13 233 Receptor kinase-like Gene Family AT5G40380 27.731 2.42e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1397 - - gmx:100810212 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1397 19 42802098 42804366 Gso3g1404 3 39984087 39986452 GST
Gso19g1397 19 42802098 42804366 Gso10g1508 10 41558579 41561027 PCT
Gso10g1508 10 41558579 41561027 Gso19g1397 19 42802098 42804366 PCT