Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1508 ATGGATGTTTCCCATTCCACAATCCTCATCAGTTTCACTTTCTTGCTATTCCTACCTTCTTCCAAACCAGTTTCCGATTATAGCACATTAGTCTACAAAACCTGTGCAAGCCAAACCTTCAACGACCAATTATTATCTCAAACACTCAACTCTCTGTTCCAACAACTCATCACACAATCCTCCCAGCACAAGTTCTTCAAAACCACGGAAGCCGTTAGCGACGACACAGCCATCTCCGGCCTTTTCCAATGTAGAGATGATATCAGCAATGAAGATTGTTTCAGCTGCGTAAACTTGCTGCCTCAGATGTCAAACACCTTGTGCAGTGAATCCATATCAGCACGGGTTCAGCTTGACGGTTGCTACATTCACTACGAGACAGAGGAACTTCCCGAACCAGAAACAAAAAGTGAATCTAAAAGTAGAAATTTGATTATTCACAATGAGTGTGGGGAACCGGTTGTGGATTATATCAAGTTTAAAGAGTTGATGGACGAGGCGTTTGTGAATCTGGAAAGTGGGATCCTAAACAGTAATGGGTACTATGCAATGAACTATAAATCAGTGAAATTGATGGCGCAGTGTGAAGGGGATTCAGATATTTGTGACTGTAGCAATTGCGTGAGCGATGCAGTGCAGGTTGCAAAGGAAGAATGCGGAACTTCACTTTCGGCACGAATATATCTTGACAAGTGTTTCATAAGCTACTATAACATTCCTCGCAACTTTGTCCCAGGAGCAAGAAGAAATAACAACACCGAAAAGTTGGCAGCAATAATTGTTGGAGGGGCCGCAACTCTGTTTTTGGGTTTTGCTTTTTTATCACTGCTTAACTCTCGGTTTAGAAAAGACGATTATGAATAG 864 0.4201 MDVSHSTILISFTFLLFLPSSKPVSDYSTLVYKTCASQTFNDQLLSQTLNSLFQQLITQSSQHKFFKTTEAVSDDTAISGLFQCRDDISNEDCFSCVNLLPQMSNTLCSESISARVQLDGCYIHYETEELPEPETKSESKSRNLIIHNECGEPVVDYIKFKELMDEAFVNLESGILNSNGYYAMNYKSVKLMAQCEGDSDICDCSNCVSDAVQVAKEECGTSLSARIYLDKCFISYYNIPRNFVPGARRNNNTEKLAAIIVGGAATLFLGFAFLSLLNSRFRKDDYE* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1508 287 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Gso10g1508 287 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 6 286 - -
Gso10g1508 287 Gene3D - 150 240 IPR038408 -
Gso10g1508 287 Gene3D - 27 129 IPR038408 -
Gso10g1508 287 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 286 - -
Gso10g1508 287 ProSiteProfiles Gnk2-homologous domain profile. 142 241 IPR002902 -
Gso10g1508 287 Pfam Salt stress response/antifungal 160 237 IPR002902 -
Gso10g1508 287 Pfam Salt stress response/antifungal 43 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1508 Gso-Chr10 41558579 41561027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g1508 8 236 Receptor kinase-like Gene Family AT5G40380 27.586 7.86e-11 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1508 - - gmx:100795973 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1397 19 42802098 42804366 Gso10g1508 10 41558579 41561027 PCT
Gso3g1404 3 39984087 39986452 Gso10g1508 10 41558579 41561027 PCT
Gso10g1508 10 41558579 41561027 Gso19g1397 19 42802098 42804366 PCT
Gso10g1508 10 41558579 41561027 Gso3g1404 3 39984087 39986452 PCT