Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1387 ATGTCCAACAACAATAAGGTGAAGGGCCTCCTTAAAGGCCTAAGATTCATTTCTCAGATATTCGATACCGATGAAAAAGACTCAGAAATTCAGATTAGTAATCCCACAGATGTAAGGCATGTGGGGCATATTGGATTGGATGGTCACGATGGTCCCTCTGAAAATGATCCCAGCTGGATGAACGAGTTTAAACCCGATGATTCAGTCCAAAGGACCTCTCAAGATTCAAATGAGTTTCCCAAATCATCTAAGCGGCAAACAAAATCAATGGGGAACATAAGAGAGTCTCATGCAAAGGAAAAATCAGACAGGAGGCCAAGGCCACATAAAAAGTCATCCAAAACTAATTCAGACCAAAATGATTCATGCAATGGGGACACGGATTCACTCCAACAACAACAAGGGAATGATTTTCCACCTAAAAAGTCTCGTCCCAAGATGTCAAAAGATGGTTCCAATAATGTTGGTGGTGACTCATCCAAAACCAGATCAAAACCTCATCATCATCATCATCATCATTCTAGAAACTCATACTCCAATAATAATCAAGAAGGCCATGCTAGACACAGTTCCAAGACTAGGACCACACACGGGTCCTTTGAAGAAGATGCACATTCTAGGAACAAACACGGGTCCTTTGAAGAAGAAGAACAATTTCAAAGACGCTCTTGTGAAAATATACTGAAAAGTTACCCAAATTAG 702 0.406 MSNNNKVKGLLKGLRFISQIFDTDEKDSEIQISNPTDVRHVGHIGLDGHDGPSENDPSWMNEFKPDDSVQRTSQDSNEFPKSSKRQTKSMGNIRESHAKEKSDRRPRPHKKSSKTNSDQNDSCNGDTDSLQQQQGNDFPPKKSRPKMSKDGSNNVGGDSSKTRSKPHHHHHHHSRNSYSNNNQEGHARHSSKTRTTHGSFEEDAHSRNKHGSFEEEEQFQRRSCENILKSYPN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1387 233 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 5 218 IPR044510 -
Gso3g1387 233 CDD CRIB 30 68 - -
Gso3g1387 233 MobiDBLite consensus disorder prediction 24 233 - -
Gso3g1387 233 ProSiteProfiles CRIB domain profile. 32 45 IPR000095 -
Gso3g1387 233 MobiDBLite consensus disorder prediction 117 139 - -
Gso3g1387 233 Pfam P21-Rho-binding domain 31 82 IPR000095 -
Gso3g1387 233 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC11 5 218 - -
Gso3g1387 233 SMART PBD_5 32 66 IPR000095 -
Gso3g1387 233 MobiDBLite consensus disorder prediction 88 102 - -
Gso3g1387 233 MobiDBLite consensus disorder prediction 187 223 - -
Gso3g1387 233 MobiDBLite consensus disorder prediction 65 87 - -
Gso3g1387 233 Gene3D CRIB domain 26 102 IPR036936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1387 Gso-Chr3 39834368 39835964 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1387 - - gmx:102666076 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1382 19 42648905 42650563 Gso3g1387 3 39834368 39835964 GST
Gso3g1387 3 39834368 39835964 Gso13g0950 13 23870759 23872607 PCT
Gso13g0950 13 23870759 23872607 Gso3g1387 3 39834368 39835964 PCT