Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g0950 ATGTCCGGCAACAAGGTGAAGGGCATTCTTAGATACATATCTCAATTATTTGAGACTGAAAAAGAACAAGACATACAGATTGGATTTCCCACGGATGTAGAGCACGTGACCCATATAGGGTGGGATGGACCCTCTGTAAATTATCCTAGCTGGATGAGCCAATTTAAAACTGCTCCAGGATTTTCATCAGCACCTCTAGATGTTCAAAATAAAGGACAGGACAATGCCAAATGGGTCTCCGAAGATTCAAGGAGAAGAAGTACTCGGGACTTGCCGGATTTACCCAAGGCATCTAAAAGGAAATCAAACAAACCAAGGCAATCAAGAAAGTCATCGAACAAACCCAAGGAAGAATCCACCCTGACCCGAATACCCATACCCGTATCCACGGATCACCCGCTTCCAACCCTACCCGTATCCGATATTCCTAAAAAGTCTCGTCGCCAGAAGACAAAGGAGAATTCTAGTGGTGGGTCATCCAAATTGAGATCCAAAGCCCAACCCGCTTCAGAATCTGGATCCCCGACCCAATTCAAGTCTAGGATAAACCAAGGTCCTTTGAAGAAAATGGACACGGTATCTTAA 585 0.4479 MSGNKVKGILRYISQLFETEKEQDIQIGFPTDVEHVTHIGWDGPSVNYPSWMSQFKTAPGFSSAPLDVQNKGQDNAKWVSEDSRRRSTRDLPDLPKASKRKSNKPRQSRKSSNKPKEESTLTRIPIPVSTDHPLPTLPVSDIPKKSRRQKTKENSSGGSSKLRSKAQPASESGSPTQFKSRINQGPLKKMDTVS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g0950 194 SMART PBD_5 27 58 IPR000095 -
Gso13g0950 194 MobiDBLite consensus disorder prediction 77 100 - -
Gso13g0950 194 ProSiteProfiles CRIB domain profile. 27 40 IPR000095 -
Gso13g0950 194 MobiDBLite consensus disorder prediction 155 194 - -
Gso13g0950 194 MobiDBLite consensus disorder prediction 63 194 - -
Gso13g0950 194 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 7 172 IPR044510 -
Gso13g0950 194 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 7 172 - -
Gso13g0950 194 Pfam P21-Rho-binding domain 26 60 IPR000095 -
Gso13g0950 194 Gene3D CRIB domain 20 71 IPR036936 -
Gso13g0950 194 CDD CRIB 25 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g0950 Gso-Chr13 23870759 23872607 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g0950 - - gmx:100790434 389.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1382 19 42648905 42650563 Gso13g0950 13 23870759 23872607 PCT
Gso3g1387 3 39834368 39835964 Gso13g0950 13 23870759 23872607 PCT
Gso13g0950 13 23870759 23872607 Gso19g1382 19 42648905 42650563 PCT
Gso13g0950 13 23870759 23872607 Gso3g1387 3 39834368 39835964 PCT