Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1382 ATGTCCAACAACAACAAGGTGAAGGGCCTCCTTAAAGGCCTAAGATTCATCTCTCAGATATTCGATACTGATGAAAAAGACTCGGAAATTCAGATTAGCAATCCCACAGATGTAAAGCATGTGGCGCATTTAGGTTCTGGTTCCTCTGAAAATGATCCCAGCTGGATGAACGAGTTTGAATCTGTCCCATGGAATTCATCTGCACCCCAAAATCTTAATGGAGACATTCATAGCAAAAGATCCGATAATTCAGTCCAAAGGACCTCTCACGATTCAATGGAAAGAGGTTCAAGGTCAGGGCATAGTCAAAGTGAAGAGAAGGACTCACGTGAGTTTCCGAAATCATCCAAGCGGCAAACGAAATCAATGGGAAACATAAGAGAGTCTCATGCAAAGGAAAAGTCAGACCGGCCAAGGCCACCTAAAAAGTCATCCAAACCTAATTCACACCCAAATGATCCATGCAATGGGGACACAGATTCACTCGAACAACAACAACAAGGGAGTGATTTGTCACCTAAAAAATCTCGCCCCAAGATGTCAAAAGATGGTTCCAATGTTGGTAGTGGCTCATCCAAATCCAGATCAAAACCCCATCATCATCATCATCATCATCATTCTAAGGACTCAAACTCCAATATTAAAGAAGTCCATGCTAGACACAGTTCTAAGTCCAGGACCAAACACGGGTCCTTTGAAGAAGATGCACAAACTAGGAACAAACACGGGTCCTTTGAAGAGGAAGAAGGACAATTTCAAAGACGTTCTACTGAAAATATACTGAAAAGTTACCCAAATTAG 801 0.4207 MSNNNKVKGLLKGLRFISQIFDTDEKDSEIQISNPTDVKHVAHLGSGSSENDPSWMNEFESVPWNSSAPQNLNGDIHSKRSDNSVQRTSHDSMERGSRSGHSQSEEKDSREFPKSSKRQTKSMGNIRESHAKEKSDRPRPPKKSSKPNSHPNDPCNGDTDSLEQQQQGSDLSPKKSRPKMSKDGSNVGSGSSKSRSKPHHHHHHHHSKDSNSNIKEVHARHSSKSRTKHGSFEEDAQTRNKHGSFEEEEGQFQRRSTENILKSYPN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1382 266 MobiDBLite consensus disorder prediction 80 143 - -
Gso19g1382 266 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC7-LIKE ISOFORM X1 7 201 - -
Gso19g1382 266 MobiDBLite consensus disorder prediction 194 208 - -
Gso19g1382 266 PANTHER CRIB DOMAIN-CONTAINING PROTEIN RIC8 7 201 IPR044510 -
Gso19g1382 266 MobiDBLite consensus disorder prediction 148 174 - -
Gso19g1382 266 MobiDBLite consensus disorder prediction 47 79 - -
Gso19g1382 266 ProSiteProfiles CRIB domain profile. 32 45 IPR000095 -
Gso19g1382 266 MobiDBLite consensus disorder prediction 209 255 - -
Gso19g1382 266 Pfam P21-Rho-binding domain 31 62 IPR000095 -
Gso19g1382 266 MobiDBLite consensus disorder prediction 31 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1382 Gso-Chr19 42648905 42650563 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1382 - - gmx:102666244 471.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1382 19 42648905 42650563 Gso3g1387 3 39834368 39835964 GST
Gso19g1382 19 42648905 42650563 Gso13g0950 13 23870759 23872607 PCT
Gso13g0950 13 23870759 23872607 Gso19g1382 19 42648905 42650563 PCT