Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1346 ATGTCGAATGACAAAGACCAGAGGAATGAAGAATCAAACAACTACAGAATCATATCTTCGAAAAGACAAAATCAAAAGACACAAAAATTCTCCTACATTACAGATCCTGTGGTCTCTGGTTCTTTGATTTATGGAAGATATGCAGAATGTTTTACTCAGATCATTGTAACCTCTTTCATTGGGTTGATATTTGCCGTGGTCTTCCATTTTGGTCTGAAACAGACTAGAGATCGAAAGATCATCCCACGTATAAGATTGTCACGCGCAGGCCACTTACCAAAGCTTGAAAGGTTCTCCCATTACGTAGCTAGGCAAATGGGATTCAAAGATAGGAGAAATTGTCCTCATCTATGTAGATTGGCTTCTGAATACATACGGAAATACGAGGGATTTGAAGATGATATATACGCCTTCTTTGAGAATGAACCAGATGCTGATTCACTTTATGTGAAGCTCGTAGAGGAGTTTGAGAGATGCATTCTTAGTTACTTAGGATTCCATTGGAACTACGGTGATCTAGTTATGAGTCAGGTGTTGAGCTCGGAAAATGAGCCAAAAAAGAAGCTCAAGAGCATAGTTATGGCAGCTACAAGGGAACAAAGGATTGAGAGACTTGCCAAGAATCTGAAGGTAGCTAGAGTTTTTAATACATTAGTAGAAGAGATGAAAGCAATGAGAGTTGCTACAAGTGATGACTCTCGATGTACAGAAGTGATGGCTCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTTCTGTTAATGGGTGGAGGTATGGGAGCTGGCAAGAGCACCGTGCTCAAAGATATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCCGCAAATGCCGTAATAATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGTCACCATGACATGATCCAAACAGCAGAACTGGTACATCAATCATCCACAGATGCAGCCTCATCCCTCCTAGTAACAGCATTAAACGAGGGACGAGATGTTATTATGGATGGCACACTCTCCTGGGTGCCATTTGTTGTGCAGACAATAACAATGGCTAGGAATGTTCACCGTCGCCGTTACCGCATGGGAGAAGGCTATAGGGAGAAGGAGGATGGAACAGTAATCGAAAACTATTGGGAAAGAATTAAAGATGAAGAACCTGAACAAGTTGGTGGCAAAAAGAGAAAACCATATAGGATAGAGCTGGTTGGTGTTGTGTGTGATGCTTATCTTGCAGTTGTCAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAATAAAGTCACAGTTGAAATCCCACAGGAGATTTGCTGAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGCCTATACTTCACAAACGCATTAGAAGGCCCAGCTAAGTTGATAGGATGGAAAGATAGAGACAAAACACTGCTTGTTGATCCAGATGAATTCGACTGTATGAAGAGGCTAGCCATGCTGAATGAAGATGCAAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTCAAGTATTCAATCCAAAAAATTGAAAGCATGAACTATAATAAAGTCACCATGGAGAACAGATGA 1674 0.417 MSNDKDQRNEESNNYRIISSKRQNQKTQKFSYITDPVVSGSLIYGRYAECFTQIIVTSFIGLIFAVVFHFGLKQTRDRKIIPRIRLSRAGHLPKLERFSHYVARQMGFKDRRNCPHLCRLASEYIRKYEGFEDDIYAFFENEPDADSLYVKLVEEFERCILSYLGFHWNYGDLVMSQVLSSENEPKKKLKSIVMAATREQRIERLAKNLKVARVFNTLVEEMKAMRVATSDDSRCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAANAVIIEADAFKESDVIYKALSSRGHHDMIQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGEGYREKEDGTVIENYWERIKDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRIKSQLKSHRRFAEAFMTYCQLVDNARLYFTNALEGPAKLIGWKDRDKTLLVDPDEFDCMKRLAMLNEDANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQKIESMNYNKVTMENR* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1346 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 244 384 IPR027417 -
Gso3g1346 557 PANTHER UNCHARACTERIZED 50 556 IPR044802 -
Gso3g1346 557 MobiDBLite consensus disorder prediction 1 22 - -
Gso3g1346 557 Pfam Zeta toxin 243 354 IPR010488 GO:0005524|GO:0016301
Gso3g1346 557 Gene3D - 232 467 IPR027417 -
Gso3g1346 557 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 50 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1346 Gso-Chr3 39351994 39356536 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1346 - - gmx:121172610 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1347 19 42169321 42173076 Gso3g1346 3 39351994 39356536 GST
Gso3g1346 3 39351994 39356536 Gso2g1164 2 14561377 14565527 PCT
Gso2g1164 2 14561377 14565527 Gso3g1346 3 39351994 39356536 PCT