Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1347 ATGAAAGCAATGGGAGTAGCTACAAGTGATGACTCTCGATGCACAGAGGTGATGGCCCCAGTAGCTCATAGCGATAGGAGTCCAGTGCTTCTCTTAATGGGTGGAGGTATGGGTGCTGGCAAAAGCACCGTGCTCAAAGATATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCCGCAAATGCTGTAATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTTAGCTCAAGAGGTCACCATGACATGATTCAAACAGCAGAACTGGTACATCAAGCATCCACAGATGCGGCCTCATCCCTCCTAGTAACAGCATTAAACGAAGGACGAGATGTTATTATGGATGGCACACTTTCCTGGGTGCCATTTGTTGTGCAGACAATAACAATGGCTAGGAATGTTCACCGTCGCCGTTACCGCATGGGAGAAGGCTATAGGCTGAAGGAGGATGGAACTGTAATTGAAAACTATTGGGAAAGAATTAAAGACGAAGAACCTGAACAAGTTGGAGGCAAAAAGAGAAAACCATATAGGATAGAACTGGTTGGAGTAGTATGTGATGCTTATCTTGCAGTTGTCAGAGGCATAAGGAGAGCTATCATGTGCAGAAGAGCAGTGAGAATAAAGTCACAGTTGAAATCCCACAGGAGATTTGCTGAGGCATTTATGACTTACTGTCAACTAGTAGATAATGCACGACTATACTTCACAAACGCATTAGAAGGCCCAGCTAAGTTGATAGGATGGAAAGATAGAGACAAGACACTGCTTGTTGATCCAGATGAATTCGACTGTATGAAGAGGCTAGCCAAGTTGAATGAAGATGCCAACTCCATTTATGAACTTTACAAGCACCCCAACCCAGCTTGTGAAGCTGGATCAGTATGGAAAGACATTGTATTATCTCCTTCAAGGTTGAACATCCAACAGGAGCTCAAGTATTCGATCCAAAAAATTGAAAGCATGAACTATAATAACGTCACCATGGAGAACAGATGA 1011 0.4372 MKAMGVATSDDSRCTEVMAPVAHSDRSPVLLLMGGGMGAGKSTVLKDILKEPFWAGAAANAVIIEADAFKESDVIYKALSSRGHHDMIQTAELVHQASTDAASSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRRRYRMGEGYRLKEDGTVIENYWERIKDEEPEQVGGKKRKPYRIELVGVVCDAYLAVVRGIRRAIMCRRAVRIKSQLKSHRRFAEAFMTYCQLVDNARLYFTNALEGPAKLIGWKDRDKTLLVDPDEFDCMKRLAKLNEDANSIYELYKHPNPACEAGSVWKDIVLSPSRLNIQQELKYSIQKIESMNYNNVTMENR* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1347 336 Pfam Zeta toxin 22 134 IPR010488 GO:0005524|GO:0016301
Gso19g1347 336 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 335 - -
Gso19g1347 336 Gene3D - 11 250 IPR027417 -
Gso19g1347 336 PANTHER UNCHARACTERIZED 1 335 IPR044802 -
Gso19g1347 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 156 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1347 Gso-Chr19 42169321 42173076 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1347 - - gmx:100794775 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1347 19 42169321 42173076 Gso3g1346 3 39351994 39356536 GST
Gso19g1347 19 42169321 42173076 Gso2g1164 2 14561377 14565527 PCT
Gso2g1164 2 14561377 14565527 Gso19g1347 19 42169321 42173076 PCT