Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1164 TCAGAGTATAATGGCAAGCCCACATTCACAGAGATCGTGGTGGCTTCCTCTATTGGGTTGATATTTGCCGCAGCAATGCATTATCGCGTTAAAACAAATAGGGATCGACAGATCATGCCACGTCTGAGAAAATCAAAGGCAAACCAAACCCCAAAGCTTGAAAAGTTCTCTCATTACGTAGCTAGGCAAATGGGGTTGAAAGACAGGAGAAGTTGTCCTCTTCTTTGTAAATTGGCTTCTGAATACATAAGGAATTCAGAGGATTGTGAAGATGATCTCTACGCCTTCTTCGAGAACGAACCAGATGCGGATTCACTTTCAGTCAAGCTTGTGGAGGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGACCCATGGTGATGTTTTGATAAGTCAGGTGTTTAGCTCTGAAGTTGAACCAAAAGCGAAGCTCAGGCACATAGTTATGGCGGCAACTAGGGAACAAAGGTTCGAGAGAGTGACCAAGAATCTGAAGGTGGCTAGAGTTTTCAACACATTAGTGGAAGAGATGAAAGCAATGGGACTTGCCACAAATGATGACTCTCAATGCACAGAGGTGATGGCTCCAGTAGCACACTGTGATAGGAGCCCAGTGCTTCTTTTCATGGGTGGTGGCATGGGAGCTGGCAAGAGCACTGTGCTTAAGGACATTCTCAAAGAACCTTTCTGGGCAGGAGCAGCAGGTAATGCCGTAATCATTGAGGCAGATGCCTTCAAAGAATCAGATGTCATCTATAAGGCCCTCAGTGCAAGAGGGCATCAGGACATGATTCGAACAGCTGAACTGGTACACCAATCATCCACTGATGCAGCCTCATCCCTCCTAGTAACAGCACTAAATGAGGGGCGTGATGTAGTTATGGATGGCACACTCTCCTGGTTACCATTTGTTGTGCAGACAATAACAATGGCTAGAAATGTCCACCGCCGCCGTTACCGCATGGGACCTGGCTACAAGGTAAACGAGGATGGAACTGTGACCGAAAACTATTGGCAGCGAATTGAGGGGGAAGGGCCAGAACTAGTTGGAGGCAAAATGAGAAAACCATATAGGATAGAGCTGGTTGGAGTAGTATGTGATGCTTATCTTGCAGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAGTCACAATTGACATCTCACAAGAGATTTGCTGATGCATTTCTGACTTATTGCCAGCTTGTAGACAATGCCCGGCTATACAGTACAAATTCTTTGGAAGGCCCACCTAAGTTGATAGGATGGAAAGATAGAGACAAGACATTGCTCGTTGATCCAGATGAAATAGATTGTTTGAAGAGGATTTCTACGTTGAATGAAAAGGCCAACAACATATATGAACTTTACAAGCACCCCAACCCAACTTGTGAAGCTGGATCGATATGGAAAGACATTGTACTATCTCCTTCAAGGTTGAACATCCAACAAGAGCTGAAGTATTCAATCCAAAAGGTTGAGAAAATAAAATGTACTAGTAGCTCTTTATGA 1539 0.4418 SEYNGKPTFTEIVVASSIGLIFAAAMHYRVKTNRDRQIMPRLRKSKANQTPKLEKFSHYVARQMGLKDRRSCPLLCKLASEYIRNSEDCEDDLYAFFENEPDADSLSVKLVEEFERCILSYFAFHWTHGDVLISQVFSSEVEPKAKLRHIVMAATREQRFERVTKNLKVARVFNTLVEEMKAMGLATNDDSQCTEVMAPVAHCDRSPVLLFMGGGMGAGKSTVLKDILKEPFWAGAAGNAVIIEADAFKESDVIYKALSARGHQDMIRTAELVHQSSTDAASSLLVTALNEGRDVVMDGTLSWLPFVVQTITMARNVHRRRYRMGPGYKVNEDGTVTENYWQRIEGEGPELVGGKMRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLTSHKRFADAFLTYCQLVDNARLYSTNSLEGPPKLIGWKDRDKTLLVDPDEIDCLKRISTLNEKANNIYELYKHPNPTCEAGSIWKDIVLSPSRLNIQQELKYSIQKVEKIKCTSSSL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1164 512 Pfam Zeta toxin 203 313 IPR010488 GO:0005524|GO:0016301
Gso2g1164 512 Gene3D - 190 428 IPR027417 -
Gso2g1164 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 338 IPR027417 -
Gso2g1164 512 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 509 - -
Gso2g1164 512 PANTHER UNCHARACTERIZED 2 509 IPR044802 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1164 Gso-Chr2 14561377 14565527 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1164 - - pvu:PHAVU_007G178200g 921.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1164 2 14561377 14565527 Gso2g1164 2 14561377 14565527 ECH
Gso19g1347 19 42169321 42173076 Gso2g1164 2 14561377 14565527 PCT
Gso3g1346 3 39351994 39356536 Gso2g1164 2 14561377 14565527 PCT
Gso2g1164 2 14561377 14565527 Gso19g1347 19 42169321 42173076 PCT
Gso2g1164 2 14561377 14565527 Gso3g1346 3 39351994 39356536 PCT