Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1286 ATGTCAGTTGCACCAGTTGACGGTATTCCCTCATTAAACAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCTAGTGCAGCATGTACTTGTGCAGCGCTGTGTTCCATCTCAAAAGAAGAGAGTTTATGGGAGAACGTATGTTCCTCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTGTTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCACTTATTGTAAACAAGGAGGTTGTAGGGTATCAACCAAACAACTATCTCGAGTACCCGGACAATTGGACTGAAGCTGAATATTATGGGGACATGAATGAATCTGAAAGCATCTCTCCATCAGATTTTGTTTCTATAGTAGATATTAGGTTCAAGGGGAAACCAATCTGTTCCAAAGTTCTGTGGGGAATTCCAAATGCAAATGGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATATTCTCACTTATGCAGATAGAGATGATAACAATGATGGAGCGGTTCACCTTTCTGTATCTGATGGTCTGCCACCAATTACATCCTTGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCGGGAACTCCGTGAAGGGCTCCAGCTTAGTTGGATTATAGTAAACAGGAAAATAAAGCAAGCTGCAAATCTTGCTAGCTGGAGCCCTCTTGGTGGTCAAAGACACTGGCCAACCGATAAGGATTTTGTTATCCGCTTTGGATCAGTTCTACCCGCCAAGGACATTCTTCCTTGTCAGGTAGCAGAGTGTATCCTTATTATGAAGTTTAGAGTGATTCACACTGAAGAAGATGGGTTTCAAACAACTCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCTTATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTCGAGTCTTGTCATATGTATTCAAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTCGGTTGGACAGACTTTGTATTTTAAGTGGCATTGCAGCATTTATGACGTTCTGGTACTGTGTTTTATGA 1122 0.4127 MSVAPVDGIPSLNSDLFYDIFRRLDGATLASAACTCAALCSISKEESLWENVCSSMWPSTNREDVKSLISSVGGFRKFYADCFPLIVNKEVVGYQPNNYLEYPDNWTEAEYYGDMNESESISPSDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDNNDGAVHLSVSDGLPPITSLERERKDGKLWRELREGLQLSWIIVNRKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPAKDILPCQVAECILIMKFRVIHTEEDGFQTTLKLTELSMQLEDMEGAHVNGRNSLLILKEALSSRRSKNYGEVLESCHMYSKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCVL* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1286 373 Gene3D - 3 87 - -
Gso3g1286 373 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
Gso3g1286 373 SUPERFAMILY F-box domain 5 79 IPR036047 GO:0005515
Gso3g1286 373 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1286 Gso-Chr3 38590367 38593670 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1286 - - gmx:100500689 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1286 19 41429502 41435840 Gso3g1286 3 38590367 38593670 GST
Gso3g1286 3 38590367 38593670 Gso10g1391 10 40324737 40327813 PCT