Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g1391 ATGTCTCAAACCCTCGGTTCCGATGAGCCACCCCAAACCACCGATTCCCACACCCCCTCCCTCCTCCACCTCTCCTTCAACCAGGACTCCGGTTGCTTCGCCGCCGCCACCGACCGCGGCTTCCGCATCTATAACTGCGACCCCTTCCGCGAGATCTTCCGCCACGACTTCGGCTCCGGCGGCGGTGGCGTCGCCCTCGTCCACATGCTCTTCCGCTGCAACATCCTCGCCTTCGTCGGCGCCTCCTCCTCCTCCTCCTCCTCCGAACCCCGCTATCCTCCCAACAAGGTCATGATCTGGGACGACCACCAGTCCCGCTGCATCGGCGAGCTCTCCTTCCGCTCCGAAGTTAAAGGCGTCCGTCTCCGCCGCGACCGAATCGTCGTCGTCCTCGCCCACAAGATCTTCGTCTACAACTTCTCCGATCTCAAGGTGCTGCACCAAATTGAGACGATTGTAAACCCTAAGGGCCTTTGCGACCTTTCACATGTTTCCGCCACGATGGTGTTGGTGTGCCCCGGGTTGCAGAAGGGGCAGGTTAGGGTTGAGCACTACGCTTCCAAGAGGACCAAGTTCATCATGGCTCATGATTCCCGAATCGCGTGTTTTGCACTCACGCACGATGGGAGGTTGCTTGCCACCGCCAGCTCCAAGGGCACACTCGTTAGGCTCTTCAATACCCTCGACGGTTCACTGCTCCAAGAGGTACGGCGGGGTGCAGACAGAGCAGAGATATACTGCCTTGCTTTTTCTCCTACTGCGCAGTGGCTGGCTGTCTCAAGTGACAAGGGGACCGTTCATGTTTTCAACCTCAAGGTAGATTCCGGACTGTTGGGGCATGACAGATCACATGGTACTTCTGAGGCAAATCCTTCTAGCCCCACTGCGGTTTCATCTCTTTCCTTTTTTAAAGGTGTGCTGCCTAAGTATTTTAGCTCAGAGTGGTCTGTGGCTCAATTTCGCTTGCAAGAAGGTTTGCAATATGTTGTTGCATTTGGCCATCAAAAGAATACAGTTGTAATACTAGGCATGGATGGCAGCTTCTATCGATGTCAGTTTGATTCTGCAGCCGGTGGAGAGATGACCCAACTTGAATATTACAATTTCCTAAAGGCAGAGGAGACATTCTAG 1131 0.5482 MSQTLGSDEPPQTTDSHTPSLLHLSFNQDSGCFAAATDRGFRIYNCDPFREIFRHDFGSGGGGVALVHMLFRCNILAFVGASSSSSSSEPRYPPNKVMIWDDHQSRCIGELSFRSEVKGVRLRRDRIVVVLAHKIFVYNFSDLKVLHQIETIVNPKGLCDLSHVSATMVLVCPGLQKGQVRVEHYASKRTKFIMAHDSRIACFALTHDGRLLATASSKGTLVRLFNTLDGSLLQEVRRGADRAEIYCLAFSPTAQWLAVSSDKGTVHVFNLKVDSGLLGHDRSHGTSEANPSSPTAVSSLSFFKGVLPKYFSSEWSVAQFRLQEGLQYVVAFGHQKNTVVILGMDGSFYRCQFDSAAGGEMTQLEYYNFLKAEETF* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g1391 376 MobiDBLite consensus disorder prediction 1 20 - -
Gso10g1391 376 Gene3D - 190 365 IPR015943 GO:0005515
Gso10g1391 376 Gene3D - 4 189 IPR015943 GO:0005515
Gso10g1391 376 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 7 376 - -
Gso10g1391 376 PANTHER AUTOPHAGY-RELATED PROTEIN 18A-LIKE ISOFORM X1 7 376 - -
Gso10g1391 376 SUPERFAMILY WD40 repeat-like 11 272 IPR036322 GO:0005515
Gso10g1391 376 SMART WD40_4 186 226 IPR001680 GO:0005515
Gso10g1391 376 SMART WD40_4 7 45 IPR001680 GO:0005515
Gso10g1391 376 SMART WD40_4 229 270 IPR001680 GO:0005515
Gso10g1391 376 Pfam WD domain, G-beta repeat 239 270 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g1391 Gso-Chr10 40324737 40327813 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g1391 K22991 - gmx:100800215 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1286 19 41429502 41435840 Gso10g1391 10 40324737 40327813 PCT
Gso3g1286 3 38590367 38593670 Gso10g1391 10 40324737 40327813 PCT