Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1286 ATGTCAGTTGCACCAGTTGACAGTATTCCCTCATTAAGCAGTGATCTCTTCTATGATATATTTCGTCGACTTGATGGTGCAACATTGGCTAGTGCAGCATGTACTTGTGCAGCATTGTGTTCCATCTCAAAAGAAGAGAATTTATGGGAGAATGTATGTTCATCTATGTGGCCTTCAACCAATAGAGAGGATGTCAAAAGTTTAATATCTTCTATTGGTGGATTCAGAAAATTCTATGCAGATTGTTTCCCGCTTATTGTAAACAAGGAGGTTGTAGAGTATCAACTGAACAACTATCTCGAGTACCCGGACAATTGGACTGAAGCTGAATATTATGGGGACATGAATGAATCTGAAAGCATCTCTCCATCAGATTTTGTTTCTATAGTAGATATTAGGTTCAAGGGGAAACCAATCTGTTCCAAAGTTCTCTGGGGAATTCCAAATGCAAATGGCTATGATGGTTGGTTCTATAACTGCCCTTTCCGGATTGATATTCTCACTTATGCAGATAGAGATGATATCAATGATGGAGCGGTTCATCTTTCTGTAACTGATGGTCTGCCACCAATTACATCCTTGGAGAGGGAAAGGAAAGATGGGAAGCTGTGGCAGGTGCTCCATGAAGGGCTCCAGCTTAGTTGGATTATAGTAAACAAGAAAATAAAACAGGCTGCAAATCTTGCTAGTTGGAGCCCTCTTGGTGGTCAAAGACACTGGCCAACAGATAAGGATTTTGTTATCCGCTTTGGATCAGTTCTACCTGCCAGGGACATTCTTCCTTGTCAGGTAGCGGAGTGTATTCTTATTATGAAGTTTAGAGTGGTTCACACTGAAGAAGATGGGGTTCAAACAACTCTTAAATTAACAGAGCTGAGCATGCAGTTGGAAGACATGGAAGGTGCTCATGTTAATGGAAGAAACAGTTTGCATATACTTAAGGAAGCACTTAGCAGCCGAAGGAGCAAAAATTATGGTGAAGTACTTGAGTCTTGTCATATGTATTTGAAAGTACAGAATGAGTTGAAAGAGGAGAAGATGAGAAACGAAAGTAGGTTGGATAGACTTTGTATTTTAAGTGGCATTGCAGCATTTATGACGTTCTGGTACTGTTTTATGAAATGGTAG 1128 0.4016 MSVAPVDSIPSLSSDLFYDIFRRLDGATLASAACTCAALCSISKEENLWENVCSSMWPSTNREDVKSLISSIGGFRKFYADCFPLIVNKEVVEYQLNNYLEYPDNWTEAEYYGDMNESESISPSDFVSIVDIRFKGKPICSKVLWGIPNANGYDGWFYNCPFRIDILTYADRDDINDGAVHLSVTDGLPPITSLERERKDGKLWQVLHEGLQLSWIIVNKKIKQAANLASWSPLGGQRHWPTDKDFVIRFGSVLPARDILPCQVAECILIMKFRVVHTEEDGVQTTLKLTELSMQLEDMEGAHVNGRNSLHILKEALSSRRSKNYGEVLESCHMYLKVQNELKEEKMRNESRLDRLCILSGIAAFMTFWYCFMKW* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1286 375 PANTHER F-BOX PROTEIN-RELATED 4 369 - -
Gso19g1286 375 Gene3D - 2 106 - -
Gso19g1286 375 PANTHER F-BOX PROTEIN-RELATED 4 369 IPR045283 -
Gso19g1286 375 SUPERFAMILY F-box domain 5 79 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1286 Gso-Chr19 41429502 41435840 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1286 - - gmx:100779902 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1286 19 41429502 41435840 Gso3g1286 3 38590367 38593670 GST
Gso19g1286 19 41429502 41435840 Gso10g1391 10 40324737 40327813 PCT