Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1236 ATGGCTGATGCCACCAAGTATGTTCCCATCGCTGGTACCAACGTCTCTTCCATTCTCAAAACCAGAAAAACGGTGGCTGCTGCATACTCTTTCATACTCGCCTTCGTCGCTTTCACTGTTTTCTTAGCCTTTTCCCCTTCTTCAAACGCTTCTTCACCTTGGTTCACCAACATATTCTCTCCCACATCCACCACCGACGGCTCCTACAAGCCTCAAATTCCTAACATTTTCTCTCTCCTTTTCCCAAACACTACTTCACCCTCCAATTCTTCTGATCCCCTGCATAACAACACTCACTCTTTTAGATCTACCAATGCCACTTCTTTATCTCCTTATCCAAAAACAGCCTTAGAATCTCAAACACTCAAACAAACCTCTTTAGAAAACAGAACCCAGACAACCTTGGTGAATTCAACCCAACATGCAGTTCCTGTTCCAACCACAAACCAGACCACGGATTCTCACGCGCCAAGTTTGGAGGTGAAGTCACCACCATTCCTTGCAAGTAAGGAACCGCCAGGTGCTGTAAAAAATCAGACTTTTAACTCTGATGAAGCTAAATCTGCGAGCACAAATCAAACTACAAATGCTACTGCAACTGCAACTGCAACCAATGTTTCAGTGAGTTTCCCTGTTCAGAATGTTCCAAATCTGAACACGAGTTCTAATTCTTCGGTGAAGGTGGATTTGGTGAAGGGTACTGTTGTGTCTAATGATAATTACACCGCTTCTCTGGCGAGGAAACAGAACAATGGGAAGGATCACGCTAAGGGGAACGATGAATCGATGGAGTCTCTGATGAAGTGTGATTTTTTTGATGGAGAGTGGGTTAAGGATGATGCATATCCTCTCTATAAGCCAGATTCTTGCTCTTTGATTGATGAACAGTTCAATTGTATTAGGAATGGAAGGCCTGATAAGGATTATCAGAAATATAAGTGGAAGCCAAAGGGTTGCACCCTTCCAAGGTTGGATGCGCATCGAATGCTGCAATTGTTGAGAGGGAAACGACTGGTTTTTGTTGGCGATTCGCTCAATAGGAACATGTGGGAGTCTTTGATTTGCATATTGAGAAATGCTGTGAAAAATAAACACAATGTTTATGAAGTAAATGGAAGAGTTAATTTCAGAGGCGAAGCCGCTTATTCATTTGTTTTCGAAGATTATCACTTCTCCGTGGAGCTTTTTGTGTCTCCATTCTTGGTTCAAGAAGGGGAAATGACTGATAAGAATGGGACAAAGAAGGAAACACTTCGTCTCGATTTGGTTGGTAAATCTTCATCTCAATATAAAGATGCAGATATTCTCGTCTTCAACACTGGCCACTGGTGGACTCATGATAAAACTTCTAAAGGGCAGGACTATTATCAAGAAGGTAACCATGTGTATTCCGAATTAAACGTTCTTGAGGCATTCCGAAGAGCTTTAACAACTTGGAGCAGGTGGGTTGATGCCAACATAAATCCATCCAAGACCACGGTCTTCTTCAGAGGCTATTCTGCATCCCACTTCAGTGGTGGACAATGGAATTCAGGTGGTCAATGTGATAGTGAAACTGATCCAATTGACAACGAGAAGTACCTAACCGAGTATCCAGATAAGATGAAGGTTTTGGAGAAGGTGCTAAAGAATATGAAAACCCGTGTGACTTACCAAAACATCACTAGAATGACGGATTTCCGGAAGGATGGTCACCCCTCCATATACAGGAAGCAAAATCTATCACCTGAGGAACTAAAATCACCTTTGAGATTCCAAGACTGCAGCCACTGGTGCCTTCCGGGTGTTCCTGATTTATGGAATGAAATTCTCTACGCTGAACTTCTGTTGAGAGAGTATCGGAATCAGCATGAGCAGAAGAAAGCATAG 1869 0.4275 MADATKYVPIAGTNVSSILKTRKTVAAAYSFILAFVAFTVFLAFSPSSNASSPWFTNIFSPTSTTDGSYKPQIPNIFSLLFPNTTSPSNSSDPLHNNTHSFRSTNATSLSPYPKTALESQTLKQTSLENRTQTTLVNSTQHAVPVPTTNQTTDSHAPSLEVKSPPFLASKEPPGAVKNQTFNSDEAKSASTNQTTNATATATATNVSVSFPVQNVPNLNTSSNSSVKVDLVKGTVVSNDNYTASLARKQNNGKDHAKGNDESMESLMKCDFFDGEWVKDDAYPLYKPDSCSLIDEQFNCIRNGRPDKDYQKYKWKPKGCTLPRLDAHRMLQLLRGKRLVFVGDSLNRNMWESLICILRNAVKNKHNVYEVNGRVNFRGEAAYSFVFEDYHFSVELFVSPFLVQEGEMTDKNGTKKETLRLDLVGKSSSQYKDADILVFNTGHWWTHDKTSKGQDYYQEGNHVYSELNVLEAFRRALTTWSRWVDANINPSKTTVFFRGYSASHFSGGQWNSGGQCDSETDPIDNEKYLTEYPDKMKVLEKVLKNMKTRVTYQNITRMTDFRKDGHPSIYRKQNLSPEELKSPLRFQDCSHWCLPGVPDLWNEILYAELLLREYRNQHEQKKA* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1236 622 MobiDBLite consensus disorder prediction 87 112 - -
Gso3g1236 622 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 615 IPR029962 GO:0016413
Gso3g1236 622 MobiDBLite consensus disorder prediction 175 196 - -
Gso3g1236 622 MobiDBLite consensus disorder prediction 127 158 - -
Gso3g1236 622 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 615 - -
Gso3g1236 622 MobiDBLite consensus disorder prediction 127 196 - -
Gso3g1236 622 Pfam PMR5 N terminal Domain 268 319 IPR025846 -
Gso3g1236 622 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 321 606 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1236 Gso-Chr3 38005620 38009003 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1236 - - gmx:100785240 1230.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1236 3 38005620 38009003 Gso3g1236 3 38005620 38009003 ECH
Gso19g1239 19 40872575 40876032 Gso3g1236 3 38005620 38009003 GST
Gso3g1236 3 38005620 38009003 Gso2g1457 2 28462124 28465553 PCT
Gso2g1457 2 28462124 28465553 Gso3g1236 3 38005620 38009003 PCT