Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1457 ATGGCTGATTCCACCAAGTACATTCCCATAGGTGGCACAGGCACAACCCTCAACTCACACCTCAACACCCTCTTCCCCATTCTCAAAGCCAGAAAAACACTCACTGTTGCTTATTGCTTCACCTTTGCCTTTGTTGCTCTCACTGTTTTCCTTGCGTTTTGCCCCTCTCCAAACACCTCCTCTCCCTTCTTCACCAGCATATTCTCCTCCACTGCCACCACCGCTTCCTCTGCCAGCTCCTACAAGTCCCAACTCTCTTCCATTTTCTCTTTCTTCTTCCCCAACACCACAATTTCATCAAGTGCTACTCTTCACACCGACACCACTAGATCTAGCAATAGCACTTCTCAATCTCCTCAAACAAGTAAAAAGACATTCAAAACCACCCCTTTTGAAAACCAAACTCAAACTACTCCTCCAACCAGAAGCAAGATACCAAGTGATCATCACACTGCAAAACCACCTGATCATGTTGTAAATAAGGAACCATCGAGTGGTAACAATCATACCCAAGTTTCTGATGAGGATAAAGCTGTAAAGAAGACAAATCAATCTTCTAATGGTGTTGGGCATAGTCCGAATAAGAATTTGAGTTCTTTGGTGAATGGAGGGGGCACAGAGAAGGGTGTTGGGCATAGTAATTACACGGTTTCTTGGTCGAAGAAGCAGAAGAATGGGAGCAATGAAACGGATTCAAGGGTGAAGGATGAATTCATGGAGTCTTTGATCAAGTGTGAATTTTTTGATGGGGAATGGATCAAGGAGGATTCATATCCTCTCTATGAACCTGGTTCTTGCAATATTATCGATGAACAATTCAATTGTATCCAAAATGGAAGGCCTGATAAAGCCTTTCAGAAATATAAGTGGAAGCCAAAGGGGTGCAGCCTCCCAAGGTTGGATGGACATCGAATGCTGGATATGTTGAGAGGCAAGAGGCTTATCTTTGTTGGTGATTCCATCAATAGGAATATGTGGGAATCTCTAATTTGCATCCTGAGAAACGCTGTGAAAGACAAAAGCAAAGTTTATGAAGCAAATGGAAGAGTCCATTTCAGAGGAGAAGCCTCTTATTCATTCATATTCAAAGATTATAACTTCTCCGTGGAGCTTTTCGTATCCCCTTTCTTAGTTCAGGAATGGGAAGTTCAAGTCAAGAATGGAACAAAGAAGGAAACACTTCGTCTTGATTTAGTTGGTAAATCTTCAGTTCAATATAAAAATGCGGATATAATCATCTTCAACACTGGCCACTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAGGGTAGCCATGTCTATGATGAACTGAATGTTTTGGAGGCATTTCGAAGGGCTATAACAACTTGGAGTAGATGGATTGATGCCAACATAAATCAATCGAAGTCTATGGTATTCTTCAGAGGCTATTCTGCTTCACATTTCAGTGGGGGACAATGGAATTCTGGTGGACAATGTGACAGTGAAACCGTGCCTATCAAGAATGAGAAGTACTTGAGGGAATACCCCCCTAAGATGAGGGTATTGGAAAAGGTTTTGAAGAACATGAAAGCCCATGTCACCTACCTAAATGTCACTAAAATGACAGATTTCAGAAAGGATGGTCATCCCTCGATATATAGGAAGCAAAACCTATCACCAGAAGAGAGGAAATCTCCATTGAGGTACCAAGACTGCAGCCACTGGTGCCTCCCTGGTGTTCCAGATGCATGGAATGAGATTCTTTATGCCGAACTTCTGTTGAAACAGTATCAGAATCAGCAGAAGAGACCATAG 1791 0.4232 MADSTKYIPIGGTGTTLNSHLNTLFPILKARKTLTVAYCFTFAFVALTVFLAFCPSPNTSSPFFTSIFSSTATTASSASSYKSQLSSIFSFFFPNTTISSSATLHTDTTRSSNSTSQSPQTSKKTFKTTPFENQTQTTPPTRSKIPSDHHTAKPPDHVVNKEPSSGNNHTQVSDEDKAVKKTNQSSNGVGHSPNKNLSSLVNGGGTEKGVGHSNYTVSWSKKQKNGSNETDSRVKDEFMESLIKCEFFDGEWIKEDSYPLYEPGSCNIIDEQFNCIQNGRPDKAFQKYKWKPKGCSLPRLDGHRMLDMLRGKRLIFVGDSINRNMWESLICILRNAVKDKSKVYEANGRVHFRGEASYSFIFKDYNFSVELFVSPFLVQEWEVQVKNGTKKETLRLDLVGKSSVQYKNADIIIFNTGHWWTHDKTSKGKDYYQEGSHVYDELNVLEAFRRAITTWSRWIDANINQSKSMVFFRGYSASHFSGGQWNSGGQCDSETVPIKNEKYLREYPPKMRVLEKVLKNMKAHVTYLNVTKMTDFRKDGHPSIYRKQNLSPEERKSPLRYQDCSHWCLPGVPDAWNEILYAELLLKQYQNQQKRP* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1457 596 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 21 591 - -
Gso2g1457 596 MobiDBLite consensus disorder prediction 104 233 - -
Gso2g1457 596 Pfam PMR5 N terminal Domain 244 295 IPR025846 -
Gso2g1457 596 MobiDBLite consensus disorder prediction 104 145 - -
Gso2g1457 596 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 297 582 IPR026057 GO:0016740
Gso2g1457 596 MobiDBLite consensus disorder prediction 182 225 - -
Gso2g1457 596 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 21 591 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1457 Gso-Chr2 28462124 28465553 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1457 - - gmx:100778601 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1239 19 40872575 40876032 Gso2g1457 2 28462124 28465553 PCT
Gso3g1236 3 38005620 38009003 Gso2g1457 2 28462124 28465553 PCT
Gso2g1457 2 28462124 28465553 Gso19g1239 19 40872575 40876032 PCT
Gso2g1457 2 28462124 28465553 Gso3g1236 3 38005620 38009003 PCT