Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1239 ATGGCTGATGCCACCAAGTATGTTCCCATCGGTGGTGGCAATGTGGCCACGGACCTCAAGAGCCTCTCTTTCATTCTCAAAACCAAAAAAACAGTGGCTGCTGCATACGCTTTCATACTCGCCTTCGTCGCTTTCACTGTTTTCTTAGCCTTTTCTCCTTCCCCAAACGCTTCCTCCCCCTGGTTCACCAACATATTCTCCCCCGCATCCACCACCGATGGTTCCTACAAGCCTCAAATTCCCAACATTTTCTCTCTCCTTTTCCCAAACTCCTCTGATCCCCTGCACAATAACACTAACTCTTCTAGATCTCCTTATCCAAACACAACCACTGAATCTCAAACACTCAAAGAAACCTCTTTGGAAAACAGAACACAAACAACCTTAGTGAATTCAACCCAAGATGCAGTTCCTGTTCCAACCACAAACCAGACCACGGATTCTCACGCGCCAAGTTTGGAGGTGAAGTTTCCACCACCCCTTGCTAGTAAGGAACCACCAGGTGTTGTAAAAAACCAGACTTTTAACTCTGGTGAAGCTAAACCTATGAGCACAAATCAAACTACAAATGCTACTGCAACTGCAACCAATGTTTCAGTGAGTTTCCCTGTCCAGAATGTTCCAAATCAGAACACGAGTTCTAATTCTTCGGTGAAGGTGGATTCGGTAAAGGGTGTTGTTGTGTCGAATGATAATTACACGGCTTCTCTGGCGAGGAAACAGAGCAATGGGAAGAAGGATCACGCTAAGGGGAGCGATGAATCGATGGAGTCTCTGATGAAGTGTGATTTTTTTGATGGAGAGTGGGTTAAGGATGATGCCTATCCACTCTATAAGCCAGATTCTTGCTCTTTGATTGATGAACAGTTCAATTGTATTAGGAATGGAAGGCCTGATAAGGATTATCAGAAGTATAAGTGGAAGCCAAAGGATTGCACCCTTCCAAGGTTGGATGCGCATCGAATGCTGCAATTGTTGAGAGGGAAACGACTGGTTTTCGTTGGCGATTCGCTCAATAGGAACATGTGGGAGTCATTGATTTGCATACTGAGAAATGCTGTGAAAAATAAACACAATGTTTTTGAAGCAAATGGAAGAGTCCATTTTAGAGGCGAAGCCGCATATTCATTTATTTTCAAAGATTATCACTTCTCGGTGGAGCTTTTTGTGTCTCCATTCTTGGTTCAAGAAGGGGAAATGACTGATAAGAACGGGACAAAGAAGGAAACACTTCGTCTCGATTTGGTTGGTAAATCTTCATCTCAATACAAAGATGCAGATATTCTCGTCTTCAACACTGGCCACTGGTGGACTCATGATAAAACTTCTAAAGGGCAGGACTATTACCAAGAAGGTAGCCATGTGTATGCTGAATTAAACGTTCTTGAGGCATTCAGAAGAGCTTTAACGACTTGGAGCAAGTGGGTTGATGCCAACATAAATCCGTCCAAGACCATGGTCTTCTTCAGAGGCTATTCTGCTTCCCATTTCAGTGGTGGACAATGGAATTCAGGTGGACAATGTGATAGTGAAACTGATCCAATTGACAATGAGAAGTATCTAACCGAGTATCCAGATAAAATGAAGGTTTTGGAGAAGGTGCTAAAGAATATGAAAACCCATGTGACCTACCAAAACATCACTAGAATGACAGATTTCCGGAAGGATGGTCACCCCTCAATATACAGGAAGCAAAATCTATCACCGGAGGAAAGAAAATCACCTTTGAGATTCCAAGACTGCAGCCATTGGTGCCTTCCGGGTGTTCCTGATTTATGGAATGAAGTTCTCTATGCTGAACTTCTATTGAGAGAGTATCAGAATCAGCATGAGCAGAAGCATAGGTAA 1848 0.4329 MADATKYVPIGGGNVATDLKSLSFILKTKKTVAAAYAFILAFVAFTVFLAFSPSPNASSPWFTNIFSPASTTDGSYKPQIPNIFSLLFPNSSDPLHNNTNSSRSPYPNTTTESQTLKETSLENRTQTTLVNSTQDAVPVPTTNQTTDSHAPSLEVKFPPPLASKEPPGVVKNQTFNSGEAKPMSTNQTTNATATATNVSVSFPVQNVPNQNTSSNSSVKVDSVKGVVVSNDNYTASLARKQSNGKKDHAKGSDESMESLMKCDFFDGEWVKDDAYPLYKPDSCSLIDEQFNCIRNGRPDKDYQKYKWKPKDCTLPRLDAHRMLQLLRGKRLVFVGDSLNRNMWESLICILRNAVKNKHNVFEANGRVHFRGEAAYSFIFKDYHFSVELFVSPFLVQEGEMTDKNGTKKETLRLDLVGKSSSQYKDADILVFNTGHWWTHDKTSKGQDYYQEGSHVYAELNVLEAFRRALTTWSKWVDANINPSKTMVFFRGYSASHFSGGQWNSGGQCDSETDPIDNEKYLTEYPDKMKVLEKVLKNMKTHVTYQNITRMTDFRKDGHPSIYRKQNLSPEERKSPLRFQDCSHWCLPGVPDLWNEVLYAELLLREYQNQHEQKHR* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1239 615 MobiDBLite consensus disorder prediction 94 153 - -
Gso19g1239 615 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 19 608 - -
Gso19g1239 615 MobiDBLite consensus disorder prediction 94 151 - -
Gso19g1239 615 Pfam PMR5 N terminal Domain 261 312 IPR025846 -
Gso19g1239 615 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 608 IPR029962 GO:0016413
Gso19g1239 615 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 314 599 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1239 Gso-Chr19 40872575 40876032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1239 - - gmx:100811425 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1239 19 40872575 40876032 Gso3g1236 3 38005620 38009003 GST
Gso19g1239 19 40872575 40876032 Gso2g1457 2 28462124 28465553 PCT
Gso2g1457 2 28462124 28465553 Gso19g1239 19 40872575 40876032 PCT