Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g1121 ATGATGGATCATATTAGTAATGAGGCCAGTGTTGACCGTTTTCCAATTGGTCCTTCTGGCATTCTTGGTAGGACAATTGCTTTCAGGGTTCTTTTTTGCAAGTCTATCTCACATTTTAGGCACCACATATTTATTGTGTTGTTAGATCTCTTCTATAGGTTTAGGGGGGGTTTGGCATCCTTTATATCATGGTTGCATCCCAGGAACCCTCAAGGGATATTGGCAATGATGACAATTGTTGCTTTCTTGTTGAAACGATACACAAATGTGAAATCAAGGGCTGAAATGGCATATAGGAGGAAGTTTTGGAGAAACATGATGAGAAGTGCTTTGACCTATGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACAACAAAGATGAATGAATCAGACCTTTATGATGTGGAATTGGTGAGGAACAAGCTTCAAGAGCTCCGCCACCGTCGACAAGAGGGATCTCTCGGAGATATAATGTTTTTTATGCGTGCCGATCTTATTAGAAATTTAGGTAATATGTGTAACCCTGAACTACACAAGGGTAGGCTTCAGGTGCCTAAATTAATCAAGGAGTACATTGATGAAGTAACGACTCAATTGAGAATGGTCTGTGATTCTGATTCAGAGGAGCTATCATTGGAAGAAAAGCTTGCTTTCATGCATGAAACTAGGCATGCATTTGGGAGGACTGCTTTGCTGTTAAGTGGGGGTGCCTCTCTTGGAGCTTCTCATGTGGGTGTAGTTAAAACACTGGTAGAACATAAACTCATGCCTAGGATAATTGCTGGTTCAAGTGTGGGATCCATTATGTGTGCTGTTGTTGCCACTAGGACTTGGCCTGAGCTCCAGAGCTTTTTTGAGGATTCATGGCACTCATTGCAATTTTTTGATCAAATGGGTGGGATTTTTGCAGTTGTTAAGAGAGTCACAACATTGGGTGCTGTTCATGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACAGGCAGAATTCTTGGGATTACTGTTTGTTCCCCAAGGAAGCATGAACCGCCTAGATGTCTTAACTACTTGACTTCACCCCATGTGGTTATATGGAGTGCAGTAACCGCTTCTTGTGCCTTTCCTGGCCTTTTTGAGGCTCAAGAATTGATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCACCCTCCTTTTAACTTAGGCCCTGAAGAGGGCTCCACACCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCTATGATGCAGTTGAAAGAACTATTCAATGTCAATCATTTTATAGTTAGTCAGGCCAACCCTCATATTGCACCACTATTGAGATTGAAAGAATTTGTGCGGACTTATGGGGGCAACTTTGCTGCCAAGCTTGCTCATCTTGTGGAGATGGAGGTGAAACATAGGTGTCATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCTAAATTGTTTGCTCAAGACTGGGAAGGTGATGTGACTGTTGTTATTCCCGCAACTCTTGCTCAGTACACCAAAATTATACAGAACCCTTCTTATGGAGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGATGTACCTGGGAGAAACTTTCAGCCATAAAAGCAAATTGTGGCATTGAGCTTGCTCTTGATGAGTGTGTTGTGATTCTCAATCATATGAGAAGACTAAAGAGAATTGCTGAGAGAGCTGCTTCTGCCTCTCATGGTTTGTCCAGCACTGTCAGGTTCAGTGCTTCAAAAAGAATTCCTTCGTGGAATTGCATTGCACGAGAGAATTCGACCGGCTCCCTTGAGGACCTTACTGATGTTGCCTCCTCATTGCATCAAGGCATCGGCAGTTCCAGCAGAGCCAATGGCAAAACTTGGAAGACCCACCGTGGCATACATGATGGAAGTGACAGTGACTCTGAAAGTGTTGATTTGCATTCTTGGACAAGAACTGGCGGGCCTTTGATGAGAACTACTTCAGCAAATATGTTCGTTGATTTTCTCCAAAACTTAGAGGTTGATACGGATCCTAATAAAGGCTTAGTGAGTCACACTATCCATAATGATTTTCAGTATCATAGCCCCAGGCTCACAACACTAGATAGGAACTCTGATAGCACAGAATCTGAGCCAAGGGAAACTGGCAACAGGGTTGTCAATGTGTCCAGCATACTTGTGACCGAAGGTGATCTTCTGCAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACTTGTCACCCTTAAGTAGTAGCAGTCATGGTTTTGAAAATTACAACATTGAAGTTGCTGAATGTGTCCAAGATGAGTGTCCAGGGAAGGAGATAGATGCTGCTAGCTCTGCATCTGAACACGGAGATGATGAAGAATCCATGCCAGCCAGGTCCTTAACTGACATGCCAGATTACAATTCCATTGATCATCATTCGGGCACAGATTCGGGTATGGATCAAAGCATTGTTGACAGTTAG 2535 0.432 MMDHISNEASVDRFPIGPSGILGRTIAFRVLFCKSISHFRHHIFIVLLDLFYRFRGGLASFISWLHPRNPQGILAMMTIVAFLLKRYTNVKSRAEMAYRRKFWRNMMRSALTYEEWAHAAKMLDKETTKMNESDLYDVELVRNKLQELRHRRQEGSLGDIMFFMRADLIRNLGNMCNPELHKGRLQVPKLIKEYIDEVTTQLRMVCDSDSEELSLEEKLAFMHETRHAFGRTALLLSGGASLGASHVGVVKTLVEHKLMPRIIAGSSVGSIMCAVVATRTWPELQSFFEDSWHSLQFFDQMGGIFAVVKRVTTLGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRTYGGNFAAKLAHLVEMEVKHRCHQILELGFPLGGLAKLFAQDWEGDVTVVIPATLAQYTKIIQNPSYGELQKAANQGRRCTWEKLSAIKANCGIELALDECVVILNHMRRLKRIAERAASASHGLSSTVRFSASKRIPSWNCIARENSTGSLEDLTDVASSLHQGIGSSSRANGKTWKTHRGIHDGSDSDSESVDLHSWTRTGGPLMRTTSANMFVDFLQNLEVDTDPNKGLVSHTIHNDFQYHSPRLTTLDRNSDSTESEPRETGNRVVNVSSILVTEGDLLQPERIHNGIVFNVVKKEDLSPLSSSSHGFENYNIEVAECVQDECPGKEIDAASSASEHGDDEESMPARSLTDMPDYNSIDHHSGTDSGMDQSIVDS* 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g1121 844 MobiDBLite consensus disorder prediction 629 661 - -
Gso3g1121 844 MobiDBLite consensus disorder prediction 712 731 - -
Gso3g1121 844 MobiDBLite consensus disorder prediction 793 844 - -
Gso3g1121 844 CDD Pat_SDP1-like 164 571 - -
Gso3g1121 844 Pfam Domain of unknown function (DUF3336) 96 227 IPR021771 GO:0004806|GO:0006629
Gso3g1121 844 SUPERFAMILY FabD/lysophospholipase-like 230 576 IPR016035 -
Gso3g1121 844 MobiDBLite consensus disorder prediction 801 816 - -
Gso3g1121 844 Gene3D Cytosolic phospholipase A2 catalytic domain 230 307 - -
Gso3g1121 844 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 2 715 - -
Gso3g1121 844 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 2 715 - -
Gso3g1121 844 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 234 437 IPR002641 GO:0006629
Gso3g1121 844 MobiDBLite consensus disorder prediction 643 660 - -
Gso3g1121 844 Gene3D Cytosolic phospholipase A2 catalytic domain 308 495 - -
Gso3g1121 844 Pfam Patatin-like phospholipase 234 425 IPR002641 GO:0006629
Gso3g1121 844 MobiDBLite consensus disorder prediction 824 844 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g1121 Gso-Chr3 36527275 36531140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g1121 5 801 Acyl Lipid Metabolism Gene Families AT5G04040 73.573 0.0 1200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g1121 K14674 - gmx:100791261 1689.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g1121 3 36527275 36531140 Gso3g1121 3 36527275 36531140 ECH
Gso19g1115 19 39328444 39333503 Gso3g1121 3 36527275 36531140 GST
Gso3g1121 3 36527275 36531140 Gso10g0975 10 24243768 24248723 PCT