Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0975 ATGGATCATATAAATAACGAGGCTAGTGTTGACCCTTTTGCGATTGGCCCTTCTAGCATTCTTGGTAGAACAATTGCTTTCAGGGTTCTCTTCTGCAAGTCTATCTCACAATTGAGGCATCATATACATTTTGTGTTGTTGGATATCTTGAAAAGATTTTGGGGATTTTGGGGACCCATTGTGTCATGGTTGCATCCAAGAAACCCGCAGGGGATATTGGCAATGATGACAATAATTGCTGTCTTGTTGAAACGTTACAGCAGTGTGAAGGTGAGGGCCGAGATAGCATATAGGCAGAATTTTTGGAGAAATATGATGCGAGCTGCATTGACCTATGAGGAGTGGGCTCATGCAGCCAAGATGATTGATAGAGAGACACCAAAGATGAATGAATCGAAAGACCTTTATGATGTGGAGTTGGTGAGTAACAAGCTTCAAGAGCTTCGCCATCGCAGGCAAGAGGGGTCTCTTAGAGATATAATATTTTGTATGCGTGCAGATCTTGTTAGGAATCTAGGTAATATGTGTAATCCAGAGCTACACAAAGGTAGGCTTCAGATGCCAAGACTAATCAAGGAGTATATTGATGAGGTATCAACTCAATTGAGAATGGTTTGCAACTCTGATTCAGAGGAGCTTGCATTGGAAGAAAAGCTTTCTTTCATGCATGAAACTAGACACGCATTTGGGAGGACTGCTTTGTTGTTAAGTGGAGGTGCTTCCCTTGGAGCTTTTCATGTTGGTGTGGTTAAAACACTGGTTGAACATAAACTTTTGCCTAGGATAATTGCTGGTTCAAGTGTAGGATCCATTATGTGTTCTATTGTTGCCACTAGGTCTTGGCCTGAGCTCCAAAGCTTTTTTGAGGATTCATTGCACTCATTACAGTTTTTTGATCAAATGGGTGGGATTTTTACAGTTGTGAAGAGGGTAACAACATATGGTGCAGTTCATGAGATCAGACAGTTGCAAATGTTGTTGAGGAATCTAACAAGCAATCTTACATTTCAAGAAGCATATGACATGACGGGTCGAATTCTCGGAATTACAGTTTGCTCCCCGAGAAAGCATGAACCACCCAGATGTCTTAACTACTTGACTTCACCTCATGTTGTTATATGGAGCGCAGTCACTGCTTCTTGTGCCTTTCCTGGCCTTTTCGAGGCTCAGGAATTGATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCATCCACCATTTAATTTGGGTCCTGAAAAGGGTTCCACTTCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATGGATTTGCCTATGATGCAATTGAAAGAGCTCTTCAATGTCAATCATTTTATAGTTAGTCAGGCCAATCCTCACATTGCCCCATTATTGAGATTCAAAGAAATTATCCGAGCTTATGGAGGTAATTTTGCAGCAAAGCTTGCTCATCTAGCAGAGATGGAGGTGAAACATAGATGTAATCAAGTACTGGAACTCGGCTTTCCATTAGGTGGACTAGCCAAACTGTTTGCTCAAGACTGGGAGGGTGATGTAACAGTTGTTATGCCTGCAACTCCTGCCCAATACTTAAAAATCATACAGAACCCTTCTTATGTAGAGCTTCAAAAGGCAGCTAACCAAGGCAGAAGATGCACCTGGGAGAAGCTTTCGGCCATGAAAGCAAATTGTGGAATTGAGCTTGCTCTTGATGAGTCTGTTGCAATTCTCAATCATATGAGACGACTCAAAAGAAATGCTGAGAGAGCTGCTGCTGCTTCTCATGGTCTTCCCAGTACAGGCAAATTTAGTGGTTCAAGAAGAATTCCATCGTGGAACATCATTGCACGAGAGAATTCTACAGGCTCCCTAGAAGACCTTCATGCTGCTGCTGCTGCTACTTCCTCATTGCATCAAGGTGTTATTAGTCCCAGTGGAGCCACTGGTAAAAATTGGAAGTCCCACCGTAGCTTTCATGATGCAAGTGACAGTGAATCTGAAAGTGCTCATGACTTGAATTCTTGGACCAGATCTGGTGGGCCTTTGATGAGAACTACATCAGCAGATATGTTCATTGACTTTTTCCAGAACATAGAAGTTGATACCGAACTAAATAGAGGCAAGGTGACAAACACTACTACTAGCCCTCGTGATTTTCAGCATCACATTTCAAGGCACACAACACCTGATCATAATAGGTGGTGCTCTAAGAGAACAGAAATCGATCAGAAAGAAAATGGCAACAGGATGATTGCCATGAATGGATCTAACATAATGGTAACTGAAGGTGATCTTTTACAGCCTGAAAGGATCCATAATGGGATTGTGTTTAATGTTGTCAAGAAACAAGACTTTTTGACCCCTTCAAATAGGAATAATGATTATAATAGTTGTTGTAACAATGAAGTTGCTGAATGTGTACAAATTGAATTTCCAGGGAAGGAGGTGGATGCTCTTAGTTCAGCTTCCGAAAATGGCGATGATGGTTCCACAATGGCCAGGTCCCTAACTGAAAAACCAGATTATAATTCAACAAATCATTTCAGCAAAGATTTTGGTGAAGATCAAAGCATTGCTGACAATTAA 2565 0.4175 MDHINNEASVDPFAIGPSSILGRTIAFRVLFCKSISQLRHHIHFVLLDILKRFWGFWGPIVSWLHPRNPQGILAMMTIIAVLLKRYSSVKVRAEIAYRQNFWRNMMRAALTYEEWAHAAKMIDRETPKMNESKDLYDVELVSNKLQELRHRRQEGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQMPRLIKEYIDEVSTQLRMVCNSDSEELALEEKLSFMHETRHAFGRTALLLSGGASLGAFHVGVVKTLVEHKLLPRIIAGSSVGSIMCSIVATRSWPELQSFFEDSLHSLQFFDQMGGIFTVVKRVTTYGAVHEIRQLQMLLRNLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEKGSTSVRRWRDGSLEMDLPMMQLKELFNVNHFIVSQANPHIAPLLRFKEIIRAYGGNFAAKLAHLAEMEVKHRCNQVLELGFPLGGLAKLFAQDWEGDVTVVMPATPAQYLKIIQNPSYVELQKAANQGRRCTWEKLSAMKANCGIELALDESVAILNHMRRLKRNAERAAAASHGLPSTGKFSGSRRIPSWNIIARENSTGSLEDLHAAAAATSSLHQGVISPSGATGKNWKSHRSFHDASDSESESAHDLNSWTRSGGPLMRTTSADMFIDFFQNIEVDTELNRGKVTNTTTSPRDFQHHISRHTTPDHNRWCSKRTEIDQKENGNRMIAMNGSNIMVTEGDLLQPERIHNGIVFNVVKKQDFLTPSNRNNDYNSCCNNEVAECVQIEFPGKEVDALSSASENGDDGSTMARSLTEKPDYNSTNHFSKDFGEDQSIADN* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0975 854 SUPERFAMILY FabD/lysophospholipase-like 230 575 IPR016035 -
Gso10g0975 854 MobiDBLite consensus disorder prediction 646 660 - -
Gso10g0975 854 Gene3D Cytosolic phospholipase A2 catalytic domain 222 448 - -
Gso10g0975 854 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 234 437 IPR002641 GO:0006629
Gso10g0975 854 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 719 - -
Gso10g0975 854 MobiDBLite consensus disorder prediction 810 854 - -
Gso10g0975 854 CDD Pat_SDP1-like 164 571 - -
Gso10g0975 854 PANTHER TRIACYLGLYCEROL LIPASE-RELATED 1 719 - -
Gso10g0975 854 MobiDBLite consensus disorder prediction 816 845 - -
Gso10g0975 854 Pfam Domain of unknown function (DUF3336) 97 227 IPR021771 GO:0004806|GO:0006629
Gso10g0975 854 MobiDBLite consensus disorder prediction 633 672 - -
Gso10g0975 854 Pfam Patatin-like phospholipase 234 432 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0975 Gso-Chr10 24243768 24248723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0975 1 813 Acyl Lipid Metabolism Gene Families AT5G04040 73.382 0.0 1206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0975 K14674 - gmx:100807526 1696.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1115 19 39328444 39333503 Gso10g0975 10 24243768 24248723 PCT
Gso3g1121 3 36527275 36531140 Gso10g0975 10 24243768 24248723 PCT