Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0644 ATGAAACGTTTTGTGTTTTCTCTAGCATGGGTTTTTGCTCTTGTGCTAGCTTCTTCGTTGGCTCATGCTGCGGTTGTGGAACACACTTTTAATGTGGAGGACATTACTGTGCAGCGTTTGTGTCGTCAACAATTGATCACTGCCGTTAATGGAACCCTACCAGGACCAACAATTAACGCTCGAGAGGGTGATACTATTGTCGTCCACGTATTCAACAAGTCACCCTATAACCTTACTCTTCATTGGCACGGCATTATTCAATTTTTAACTCCTTGGTCAGACGGTCCTGAATTTGTAACTCAATGCCCAATACCTTCCGGTAGCAGATACACATACAAATTTAACCTAACGGGACAAGAAGGGACTCTTTGGTGGCATGCACACTCATCATTTCTGCGTGCTACGGTCTATGGTGCTCTTTTAATTCGGCCTCGAATTGGACACTCCTACCCTTTTCCTAAAGTATATCAAGAAGTCCCCATACTGCTTGGAGAGTGGTGGAATGCTAATGTTGTAGAGGTTGAGCACAATGCAACAGAATCCCAAACAGCGCCAATCCCCTCAGCTGCGTATACAATTAACGGTTTACCCGGCGATTCCTATAACTGCTCTGAAAATCAAATGTATCAGCTCAAAGTCAAGCAAGGAAAAACCTACTTGCTACGCATTATCAATGCTGCACTCAATGAGCAACACTTCTTCAAAATAGCAAATCACACATTCACAGTGGTAGCCATCGATGCTCTCTACACCCAACACTACAAAACTGATGTTGTAGTGCTTGCTCCAGGCCAAACCGTTGATGTCCTCTTTAGCACAAATCAACATGTGGATTCTTATTACATGGCATTCACTCCATACCATTCGGCCCCACAAATCCCAATCAACAACTCAACAACAAGAGGGCTGGTAATTTATGAGGGTGCCACATCAGTAGAAAAGCCCATATTGCCAAATCTACCGGCCCAAACCGACACACCAACGGCCCACAAGTTCTACACCAACATCACAGGGTTGGCTGGTGGACCCCACTGGGTCCCGGTGCCACGTCAGGTGGATGAGCACATGTTCATCACTTTTGGGCTTAACTTTGACCTTTGCAAAAATGTTTCAACACCAAATGGTTGCTCTGCAAGGCAACCTCCACTCTCTGCCAGCATGAACAATGAGTCATTTGTGTTGCCTCGGGGAAAAGGGTTATCAATGCTTGAAGCATTCTATAACAATGATGTTAACGGAGTGTACACTAGAGATTTTCCAAATCAGCCTCCGATTGTGTTTGACTATACCGACCCAAACATAACGAGCACTACAGAATTAGCCTTCAAAATCGCACCCAAATCAACGAAAGTGAAGACGTTGAAGTTCAATTCAACTGTTCAGATTGTACTTCAAAACACGGCCATTGTCTCTGCAGAGAACCACCCCATTCACATTCACGGCTTCAATTTCCATGTTTTGGCTCAAGGGTTCGGGAATTACAACGCCACTAGAGACGAGCCCAAGTTCAATCTTGTCAACCCTCAGATACGTAACACAATTTCTGTCCCCGTCGGAGGATGGTCCGTTGTTAGATTCCAAGCAAATAATCCAGGTGTTTGGCTTGTGCATTGCCATTTGGAAACTCATTTGCCGTGGGGGCTAGCCATGGCTTTCGAGGTTGAGAATGGGCCCACTCCTTCTTTATCAGTGCCTCCGCCTCCAGCTGATCTTCCTAGGTGCTAA 1725 0.4545 MKRFVFSLAWVFALVLASSLAHAAVVEHTFNVEDITVQRLCRQQLITAVNGTLPGPTINAREGDTIVVHVFNKSPYNLTLHWHGIIQFLTPWSDGPEFVTQCPIPSGSRYTYKFNLTGQEGTLWWHAHSSFLRATVYGALLIRPRIGHSYPFPKVYQEVPILLGEWWNANVVEVEHNATESQTAPIPSAAYTINGLPGDSYNCSENQMYQLKVKQGKTYLLRIINAALNEQHFFKIANHTFTVVAIDALYTQHYKTDVVVLAPGQTVDVLFSTNQHVDSYYMAFTPYHSAPQIPINNSTTRGLVIYEGATSVEKPILPNLPAQTDTPTAHKFYTNITGLAGGPHWVPVPRQVDEHMFITFGLNFDLCKNVSTPNGCSARQPPLSASMNNESFVLPRGKGLSMLEAFYNNDVNGVYTRDFPNQPPIVFDYTDPNITSTTELAFKIAPKSTKVKTLKFNSTVQIVLQNTAIVSAENHPIHIHGFNFHVLAQGFGNYNATRDEPKFNLVNPQIRNTISVPVGGWSVVRFQANNPGVWLVHCHLETHLPWGLAMAFEVENGPTPSLSVPPPPADLPRC* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0644 574 CDD CuRO_1_LCC_plant 28 144 IPR034288 GO:0005507
Gso3g0644 574 Pfam Multicopper oxidase 419 556 IPR011706 GO:0005507|GO:0016491
Gso3g0644 574 Gene3D - 16 144 IPR008972 -
Gso3g0644 574 Gene3D - 156 341 IPR008972 -
Gso3g0644 574 SUPERFAMILY Cupredoxins 25 169 IPR008972 -
Gso3g0644 574 Pfam Multicopper oxidase 158 308 IPR001117 -
Gso3g0644 574 TIGRFAM laccase: laccase 24 574 IPR017761 GO:0046274|GO:0048046|GO:0052716
Gso3g0644 574 SUPERFAMILY Cupredoxins 345 574 IPR008972 -
Gso3g0644 574 Gene3D - 368 574 IPR008972 -
Gso3g0644 574 ProSitePatterns Multicopper oxidases signature 1. 532 552 IPR033138 -
Gso3g0644 574 CDD CuRO_3_LCC_plant 414 557 IPR034289 GO:0005507
Gso3g0644 574 Pfam Multicopper oxidase 32 145 IPR011707 GO:0005507
Gso3g0644 574 ProSitePatterns Multicopper oxidases signature 2. 537 548 IPR002355 GO:0005507
Gso3g0644 574 SUPERFAMILY Cupredoxins 152 342 IPR008972 -
Gso3g0644 574 CDD CuRO_2_LCC_plant 159 306 IPR034285 -
Gso3g0644 574 PANTHER LACCASE-7 8 574 - -
Gso3g0644 574 PANTHER MULTI-COPPER OXIDASE 8 574 IPR045087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0644 Gso-Chr3 19041996 19046373 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0644 K05909 - gmx:100812336 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0644 3 19041996 19046373 Gso3g0644 3 19041996 19046373 ECH
Gso1g0901 1 36830154 36839252 Gso3g0644 3 19041996 19046373 GST
Gso18g1553 18 46314823 46320890 Gso3g0644 3 19041996 19046373 PCT
Gso7g1205 7 16973514 16978760 Gso3g0644 3 19041996 19046373 PCT