Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2510 ATGGCACCCTCAATTTGTTTTCTTCTTCTATCCCTTCTGTTCCTTTCATCCTCCACAAGTGGTACTGATGAAGAGGGTTTCATCTCTGTGATCATATCTGATAAGGGCCTTGATTTTGCCAAGGATATTCTGATAGACCAAGCTGTTGCCTCTATTGTTCAGTCTCAGCTGCCACAGATTGAGAAGACTGTGCAAGTCCCTCTTGTTGGAAAAGCCAAAGTGGTTCTTTCTGACATCACTATCAATCATATCCAAGTTAATTCTTCATCTGTTAATACTGGAGAGACAGGCATTGCTCTTGTCGTTTCTGGTGCCACTGCCGACTTGAGTTTGAACTGGAGGTACTCTGTTAGCAGTTGGTTAGTCCCAATTGGAATTTCGGACAGTGGAACCGCTACTGTGAAGGTTAATGATTTGCAAGTGGGACTTACTGTGAATTTAAGAAACCAAGAAGGAACTCTTAAGTTGAATCTCCTGGATTCTGGATGTCATGTTAGAGATTTATCTATAAAGTTGCATGGTGGAGCAGCTTGGCTTTATCAAGTGCTAGTAGATGCTTTTGCAGGAAATATAGCATCTGCAGTTGAAGAGGCAATTTCTAAGAAAATAAATGAGGGGATATCAACTCTTGACCTTTTATTGCAATCTCTTCCAAAAACAATCCCATTAGACGAAACTGCTGCTCTAAATGTTTCTTTCATGGACAACCCAGTGCTGAGTGATTCTGCTATTGAATTAGAAATTAATGGTTTATTCACAGGGAGAAATGAAGTTTTGGTACCTCAAGCTTACTACAGAGGATCAGGCCTTTCTCTTTCTGCTTCCTGTGGTGGCAGTTCACCAAAGATGATAACAATTTCATTACATGAAAGTGTTTTCAAATCCGGTTCCATGCTTTACTTCACTGCAGATAGTATGCAATGGATTGTTGATGAACTTCCTGATCAGGCCCTTCTGAACACTGCTGAATGGAGATTCCTTATTCCACAATTATACAAAAAATATCCAAATGACGACATGAATCTTAATATCTCTGTATCTTCTCCACCAGATATACAAGTGACAAACAAAGATGATTTTAGTGCCTCTTTTGCTGTGGAAATCTTAGGAAACAATCTTGCTGGTTGGCTTAAATTGAGAAAGTTTTCCACATCCTTGAAATGGAGTAAAATAGGGAAACTGCACATGAATTTGATTCAGTCTGTGACATCAACCGTCCTCAAGACCGTCATCATACCATACCTGAACTCGCAGTTATTGAGAGGAATTCCACTGCCAATTCTTAATGGTTTTGCCATTAAGAATGTTTGTATATTGTATGCTCCCCCTCGGATTACTGTGTGTAGTGATGTTTCTTTCTGA 1362 0.3965 MAPSICFLLLSLLFLSSSTSGTDEEGFISVIISDKGLDFAKDILIDQAVASIVQSQLPQIEKTVQVPLVGKAKVVLSDITINHIQVNSSSVNTGETGIALVVSGATADLSLNWRYSVSSWLVPIGISDSGTATVKVNDLQVGLTVNLRNQEGTLKLNLLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEEAISKKINEGISTLDLLLQSLPKTIPLDETAALNVSFMDNPVLSDSAIELEINGLFTGRNEVLVPQAYYRGSGLSLSASCGGSSPKMITISLHESVFKSGSMLYFTADSMQWIVDELPDQALLNTAEWRFLIPQLYKKYPNDDMNLNISVSSPPDIQVTNKDDFSASFAVEILGNNLAGWLKLRKFSTSLKWSKIGKLHMNLIQSVTSTVLKTVIIPYLNSQLLRGIPLPILNGFAIKNVCILYAPPRITVCSDVSF* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2510 453 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 28 240 IPR017943 GO:0008289
Gso2g2510 453 Pfam LBP / BPI / CETP family, C-terminal domain 361 439 IPR001124 GO:0008289
Gso2g2510 453 Pfam LBP / BPI / CETP family, C-terminal domain 280 357 IPR001124 GO:0008289
Gso2g2510 453 SMART bpi1_3 32 257 IPR017942 GO:0008289
Gso2g2510 453 PANTHER OS06G0309200 PROTEIN 1 358 IPR045897 -
Gso2g2510 453 PANTHER OS06G0309200 PROTEIN 359 453 IPR045897 -
Gso2g2510 453 Gene3D - 211 360 - -
Gso2g2510 453 Gene3D - 35 210 - -
Gso2g2510 453 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 243 453 IPR017943 GO:0008289
Gso2g2510 453 SMART bpi2_2 278 449 IPR001124 GO:0008289
Gso2g2510 453 PIRSF Lipid_binding_protein 357 453 IPR030675 GO:0005615|GO:0008289
Gso2g2510 453 PIRSF Lipid_binding_protein 3 359 IPR030675 GO:0005615|GO:0008289
Gso2g2510 453 Pfam LBP / BPI / CETP family, N-terminal domain 36 210 IPR017942 GO:0008289
Gso2g2510 453 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 358 - -
Gso2g2510 453 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 359 453 - -
Gso2g2510 453 Gene3D - 361 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2510 Gso-Chr2 49511764 49516508 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2510 K05399 - gmx:100807666 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0153 14 1326516 1331328 Gso2g2510 2 49511764 49516508 GST
Gso18g0738 18 8795513 8801213 Gso2g2510 2 49511764 49516508 PCT
Gso8g2667 8 44353576 44359615 Gso2g2510 2 49511764 49516508 PCT
Gso2g2510 2 49511764 49516508 Gso18g0738 18 8795513 8801213 PCT
Gso2g2510 2 49511764 49516508 Gso8g2667 8 44353576 44359615 PCT