Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0153 ATGGCACCCTCAATTTGTTTTCTTCTTCTATCCCTTCTGTTCCTTTCATCCTCCACAAGTGGTGATGAAGAGGGTTTCATCTCTGTGGTCATATCTGATAAGGGGCTTGATTTTGCCAAGGATATTCTGATAGACCAAGCTGTTGCCTCTATTGTTCAGTCTCAGCTGCCACAGATTGAGAAGACTGTGCAAGTCCCTCTTGTTGGAAAAGCCAAAGTGGTTCTTTCTGACATCACTATCAATGATATCCAAGTTAATTCTTCATCTGTTAATACTGGAGAGACAGGCATTGCTCTTGTCGTTTCAGGTGCCACTGCTGACTTGAGTTTGAAGTGGAGGTACTCTGTTAGCAGTTGGTTAGTTCCAATTGGAATTTCGGACAGTGGAACTGCTACTGTAAAGGTTAATGATTTGCAAGTGGGACTTACTGTGAATTTAAGGAACCAAGAAGGAACTCTTAAGTTGATTCTGCTGGATTCTGGATGTCATGTTAGAGATTTATCTATAAAGTTGCATGGTGGAGCAGCTTGGCTTTACCAAGTGCTAGTAGATGCTTTTGCAGGAAATATAGCATCTGCAGTTGAAGAGGCAATTTCTAAGAAAATAAATGAGGGGATATCAACTCTTGACCTTTTATTGCAATCTCTTCCAAAAACAATCCCATTAGACGAAACTGCTGCTCTAAATGTTTCTTTCGTGGACAATCCAGTGCTGAGTGATTCTGCTATTGAATTAGAAATTAATGGTTTATTCACAGGGAGAAATGAAGTTTTGGTACCTCAAGCTTACCGCAGAGGATCAGACCTTTCTGCTTCCTGTGGTGACAGTTCACCAAAGATGATAACAATTTCATTACACGAAAGTGTTTTCAAATCCGGTTCCTTGGTTTATTTCACTGCTGATAGTATGCAATGGATTGTTGATGAACTCCCTGATCAGGCCCTTTTGAACACTGCTGAATGGAGATTCCTTATTCCACAATTATACAAAAAATATCCAAATGACGACATGAATCTTAATATGTCTGTATCTTCTCCACCAGATATACAAGTGACAAACAAAGATGTCGGTGTCAACATTTTCATAGACATAACAATTGATGTTCTGGAAGATGGTGAAGTCATACCTGTTGCATGCATCTCGGTGGATTTTAGTGCCTCTTGTGCTGTGGAAATCGTAGGAAACAATCTTGCCGGTTGGCTTAAATTGAGAAAGTTTTCCACGTACTTGAAATGGAGTAAAATAGGGAAACTGCACATGAATTTGATTCAGTCAGTGACATCAACCGTCCTCAAGACTGTCCTCATACCATACCTAAACTCGCAGTTATTGAGAGGAATTCCACTGCCAATTCTTAATGGTTTTTCCATTAAGAATGCTCGTATATTGTATGCTCCCCCATGGATTACTGTGTGTAGTGATGTTTCTTTCTCAAGAGACTACTATCTCCAACAACTACCAGCTTATGTATCATAA 1476 0.3977 MAPSICFLLLSLLFLSSSTSGDEEGFISVVISDKGLDFAKDILIDQAVASIVQSQLPQIEKTVQVPLVGKAKVVLSDITINDIQVNSSSVNTGETGIALVVSGATADLSLKWRYSVSSWLVPIGISDSGTATVKVNDLQVGLTVNLRNQEGTLKLILLDSGCHVRDLSIKLHGGAAWLYQVLVDAFAGNIASAVEEAISKKINEGISTLDLLLQSLPKTIPLDETAALNVSFVDNPVLSDSAIELEINGLFTGRNEVLVPQAYRRGSDLSASCGDSSPKMITISLHESVFKSGSLVYFTADSMQWIVDELPDQALLNTAEWRFLIPQLYKKYPNDDMNLNMSVSSPPDIQVTNKDVGVNIFIDITIDVLEDGEVIPVACISVDFSASCAVEIVGNNLAGWLKLRKFSTYLKWSKIGKLHMNLIQSVTSTVLKTVLIPYLNSQLLRGIPLPILNGFSIKNARILYAPPWITVCSDVSFSRDYYLQQLPAYVS* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0153 491 Pfam LBP / BPI / CETP family, C-terminal domain 276 463 IPR001124 GO:0008289
Gso14g0153 491 Gene3D - 34 214 - -
Gso14g0153 491 Pfam LBP / BPI / CETP family, N-terminal domain 35 209 IPR017942 GO:0008289
Gso14g0153 491 SMART bpi2_2 275 473 IPR001124 GO:0008289
Gso14g0153 491 PANTHER OS06G0309200 PROTEIN 1 491 IPR045897 -
Gso14g0153 491 Gene3D - 28 462 - -
Gso14g0153 491 SMART bpi1_3 31 256 IPR017942 GO:0008289
Gso14g0153 491 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 491 - -
Gso14g0153 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 29 239 IPR017943 GO:0008289
Gso14g0153 491 PIRSF Lipid_binding_protein 2 481 IPR030675 GO:0005615|GO:0008289
Gso14g0153 491 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 242 477 IPR017943 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0153 Gso-Chr14 1326516 1331328 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0153 K05399 - gmx:100804747 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0153 14 1326516 1331328 Gso2g2510 2 49511764 49516508 GST
Gso18g0738 18 8795513 8801213 Gso14g0153 14 1326516 1331328 PCT
Gso8g2667 8 44353576 44359615 Gso14g0153 14 1326516 1331328 PCT
Gso14g0153 14 1326516 1331328 Gso18g0738 18 8795513 8801213 PCT
Gso14g0153 14 1326516 1331328 Gso8g2667 8 44353576 44359615 PCT