Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0738 ATGGCACCCTCAATTGTTTTGTCTCTACTACCCCTTCTTCTGGTTTCAACTTGTTGTTATGCGCAACCCCTTGAAGAGGGTTTTATCTCTGGGGTCATATCTGACAAGGGTCTTGAATATGCCAAGGAGTTGTTGATAGAGAAAGGTATTGCCTCCATTGTTATGCTTCAGCTGCCAGAGATTGAGAATTCTGCCCAAGTCCCTTTGGTTGGAAATGCTAAAGTGGTTCTTTCTGACATCACAATCAAGGATGTTGAAGTCAATTCTTCATCTGTTAAGACTGGGGAGAGTGGCATTGTTCTAGTGATTTCAGGTGCCATTGCTAATATGAGTATGAGGTGGAGGTACACTGTCAGCTCTTGGTTAATCCCATTTGGAATTTCAGATAGTGGGAATGCTTCAGTGAAGGTTACAGGTATGCAAGTGGGACTCACAGTAAATATAAGGAACCAAGAAGGAACACTTAAATTGGCTCTCTTAGATTATGGATGTTATGTGGGAGACTTATCTATAAAGTTGGACGGTGGTGCATCTTGGCTTTACCAATTGCTGGTAGATGTTTTTGAAGGGGATATAACATCTGCAGTTGAAGAGGGTATTTCAGAGAAAATAAAAGAAGGGATAATGAATCTTGATCATTTTTTGAAATCTCTTCCAGAGCAGATCTCACTAGACAAAACTGCTGCACTAAATGTTTCTTTTGTTGGCAATCCTGTGTTGAGTAACTCCTCTATTGCTATTGCAATTAATGGTTTATTCACAGGGAAAAATGAAGTTTTAGTACCTCAACGTTACTACCAGAAAGGAATGAAGATTTCTGCTGCCTGTGGTGGTTTACAAAAGATGATAAAGGTTTCAATACATGAAAATGTGTTCAAATCTGCTTCCCTAGTTTACTACAATGCAGGTAAAATGCAATTGATTATTGATGAACTGCCTGATCAGGACATTTTGAACACTGCTGAATGGAGATTCATAGTTCCCCAATTATACAAGCGATATCCAAATGATGACATGCAACTTAATATCTCTATATCTTCTCCACCAGTTATACAAGTGACCTACCAAGACATTGGTGCAACTATTTTTGTAGATATAACGATTGATGTTCTGGAAGACGGTGAAGTCATACCTGTTGCATGCATCTCAGTGGAAATTAGTGCTTCATGTGCTGTGGAAATTGAAGGAAACAATATTGCTGGTTGGCTCAGATTACAAACATTTTCTGCATACTTGAAGTGGAGCAAAATAGGGAAACTGCACGTGCGTCTGATCCAGTCACTAATGTCAAGTGTCCTCAAAACTGTTGTCCTTCCATACCTGAACTTCAAATTAAAGAGAGGATTCCCATTACCAATTATTGATGGTTATGGCTTTCAGAATGCAATTATCTTGTACAATCATCCATGGATTATGGTGTGTAGTGATGTTTCCTTCTTAGAAGATTACTATCTAGGTCAACAGTTAGCTTATGTTTCATAA 1482 0.3873 MAPSIVLSLLPLLLVSTCCYAQPLEEGFISGVISDKGLEYAKELLIEKGIASIVMLQLPEIENSAQVPLVGNAKVVLSDITIKDVEVNSSSVKTGESGIVLVISGAIANMSMRWRYTVSSWLIPFGISDSGNASVKVTGMQVGLTVNIRNQEGTLKLALLDYGCYVGDLSIKLDGGASWLYQLLVDVFEGDITSAVEEGISEKIKEGIMNLDHFLKSLPEQISLDKTAALNVSFVGNPVLSNSSIAIAINGLFTGKNEVLVPQRYYQKGMKISAACGGLQKMIKVSIHENVFKSASLVYYNAGKMQLIIDELPDQDILNTAEWRFIVPQLYKRYPNDDMQLNISISSPPVIQVTYQDIGATIFVDITIDVLEDGEVIPVACISVEISASCAVEIEGNNIAGWLRLQTFSAYLKWSKIGKLHVRLIQSLMSSVLKTVVLPYLNFKLKRGFPLPIIDGYGFQNAIILYNHPWIMVCSDVSFLEDYYLGQQLAYVS* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0738 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 244 479 IPR017943 GO:0008289
Gso18g0738 493 Pfam LBP / BPI / CETP family, C-terminal domain 280 464 IPR001124 GO:0008289
Gso18g0738 493 SMART bpi2_2 277 476 IPR001124 GO:0008289
Gso18g0738 493 Pfam LBP / BPI / CETP family, N-terminal domain 37 210 IPR017942 GO:0008289
Gso18g0738 493 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Gso18g0738 493 SMART bpi1_3 33 258 IPR017942 GO:0008289
Gso18g0738 493 PIRSF Lipid_binding_protein 6 483 IPR030675 GO:0005615|GO:0008289
Gso18g0738 493 Gene3D - 36 216 - -
Gso18g0738 493 PANTHER OS06G0309200 PROTEIN 1 493 IPR045897 -
Gso18g0738 493 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 493 - -
Gso18g0738 493 Gene3D - 32 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0738 Gso-Chr18 8795513 8801213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0738 K05399 - gmx:100815362 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0738 18 8795513 8801213 Gso8g2667 8 44353576 44359615 GST
Gso18g0738 18 8795513 8801213 Gso14g0153 14 1326516 1331328 PCT
Gso18g0738 18 8795513 8801213 Gso2g2510 2 49511764 49516508 PCT
Gso14g0153 14 1326516 1331328 Gso18g0738 18 8795513 8801213 PCT
Gso2g2510 2 49511764 49516508 Gso18g0738 18 8795513 8801213 PCT