Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2230 ATGCTTCTCCGAACCGCCGCCTCCGCCGCTTCTGCTTCGTCCCTCTCCCTCTTCAGCCCTACCTCCGAACCTCTCCGTTCGGTTCCCGCTCGTGGATTGGTGGTTCGCGCCGCGAAAGGATCCACGAACCACCGCGCCCTAACCGGCGTGATCTTTGAACCGTTCGAAGAGGTGAAGAAGGAGCTCGATCTCGTTCCCACCGTTCCACAAGCTTCTCTCGCCCGCCAAAAATACGTTGACGAATCCGAAGCCGCCGTTAACGAACAAATCAATGTGGAGTATAACGTTTCCTACGTTTACCATGCTATGTTTGCGTACTTTGATAGGGACAACGTTGCGCTGAGAGGTCTTGCTAAGTTTTTTAAGGAATCGAGTGAAGAAGAAAGAGAGCATGCTGAGAAATTGATGGAGTATCAGAACAAACGTGGTGGAAGAGTGAAGTTGCAGTCAATTGTGATGCCGCTTTCTGAGTTTGATCATGCAGATAAGGGAGATGCGCTGCACGCAATGGAACTCGCTCTCTCATTAGAGAAGCTAACGAACGAAAAGCTCCTTAACTTGCACAGTGTTGCCACAAAAAATGGTGACGTGCAGTTGGCTGACTTTGTGGAAACTGAGTATCTGGGTGAACAGGTGGAAGCAATCAAAAGAATATCCGAGTATGTTGCTCAGCTCAGAAGAGTTGGCAAAGGACATGGTGTTTGGCACTTTGATCAGATACTCCTCCACGAGGGAGGAGATGCAGCCTGA 750 0.5 MLLRTAASAASASSLSLFSPTSEPLRSVPARGLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQILLHEGGDAA* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2230 249 Coils Coil 121 142 - -
Gso2g2230 249 CDD Euk_Ferritin 80 239 - -
Gso2g2230 249 ProSitePatterns Ferritin iron-binding regions signature 2. 196 216 IPR014034 -
Gso2g2230 249 Pfam Ferritin-like domain 84 228 IPR008331 GO:0008199
Gso2g2230 249 ProSitePatterns Ferritin iron-binding regions signature 1. 127 145 IPR014034 -
Gso2g2230 249 PANTHER FERRITIN 24 248 - -
Gso2g2230 249 SUPERFAMILY Ferritin-like 70 243 IPR009078 -
Gso2g2230 249 ProSiteProfiles Ferritin-like diiron domain profile. 76 229 IPR009040 -
Gso2g2230 249 PANTHER FERRITIN 24 248 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gso2g2230 249 Gene3D - 44 245 IPR012347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2230 Gso-Chr2 46999763 47002030 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2230 K00522 - gmx:100787160 452.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0480 14 4567205 4570067 Gso2g2230 2 46999763 47002030 GST
Gso18g0216 18 1867267 1870402 Gso2g2230 2 46999763 47002030 PCT
Gso13g1405 13 29558062 29560497 Gso2g2230 2 46999763 47002030 PCT
Gso2g2230 2 46999763 47002030 Gso18g0216 18 1867267 1870402 PCT
Gso2g2230 2 46999763 47002030 Gso13g1405 13 29558062 29560497 PCT