Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0216 ATGCTTCTTAGAACAGCGTCCTCTTTCTCTCTCTTCAACGCCAACGGCGACCATATACTACTCCCTTCCTCTGTTCGCTACTCTCAGGGCAAACACTTGGTTCCATGCGCTACCAAGAACTCCAATAACCGGCCCTTAACCGGCGTCGTATTTGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTTGTTCCCACTGTCCCACAAGCTTCCCTTGCTCGCCAGAAGTACACCGATGAGTCTGAGGCTACTATCAACGAACAGATCAATGTGGAGTACAATGTTTCGTACGTTTATCATGCGATGTTTGCCTACTTCGATAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAGTTTTTCAAGGAGTCAAGCGAGGAGGAAAGGGAGCATGCTGAGAAATTGATGGAATATCAGAACAAGCGAGGTGGAAAGGTGAAGTTACAATCTATAGTGATGCCTCTTACTGAGTTTGACCATGAGGAAAAGGGAGATGCGCTATATGCAATGGAACTTGCCCTGTCGTTGGAGAAGCTGACAAATGAAAAGCTGCTTAACTTGCACAGTGTTGCCTCAAAGAACAATGATGTGCAATTGGCAGATTTTATTGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATAAAAAAAATCTCTGAATACGTTGCTCAACTCAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTACTCCATGAGGAAGGAGTTGCTGCTTGA 747 0.4618 MLLRTASSFSLFNANGDHILLPSSVRYSQGKHLVPCATKNSNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDESEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLTEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAA* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0216 248 PANTHER FERRITIN 27 246 - -
Gso18g0216 248 Gene3D - 44 245 IPR012347 -
Gso18g0216 248 PANTHER FERRITIN 27 246 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gso18g0216 248 SUPERFAMILY Ferritin-like 69 242 IPR009078 -
Gso18g0216 248 Coils Coil 120 141 - -
Gso18g0216 248 CDD Euk_Ferritin 79 238 - -
Gso18g0216 248 ProSiteProfiles Ferritin-like diiron domain profile. 75 228 IPR009040 -
Gso18g0216 248 Pfam Ferritin-like domain 83 227 IPR008331 GO:0008199
Gso18g0216 248 ProSitePatterns Ferritin iron-binding regions signature 2. 195 215 IPR014034 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0216 Gso-Chr18 1867267 1870402 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0216 K00522 - gmx:100810000 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0216 18 1867267 1870402 Gso18g0216 18 1867267 1870402 ECH
Gso18g0216 18 1867267 1870402 Gso13g1405 13 29558062 29560497 GST
Gso18g0216 18 1867267 1870402 Gso14g0480 14 4567205 4570067 PCT
Gso18g0216 18 1867267 1870402 Gso2g2230 2 46999763 47002030 PCT
Gso14g0480 14 4567205 4570067 Gso18g0216 18 1867267 1870402 PCT
Gso2g2230 2 46999763 47002030 Gso18g0216 18 1867267 1870402 PCT