Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1405 ATGCTTCTCAGAACAGCTTCATCTTTCTCTCTCCTCAAAGCCAACGCCGACCATATACTCCCTCTCCCCAACTCTTCTTCTTCTGGTATTATTCGCTACTCTCAGTCTCTGGGGAAAAACTTGGTTCCATGCGCTACCAAGGACACCAACAACCGCCCCTTAACCGGCGTCGTTTTTGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTTGTTCCCACCGTCCCACAAGCTTCCCTCGCTCGCCAGAAATACACCGATGACTGCGAGGCTACCATAAACGAACAGATCAATGTGGAGTACAATGTTTCGTATGTTTATCATGCGATGTTTGCCTACTTCGATAGGGACAATGTCGCGCTCAAGGGTCTTGCCAAGTTTTTCAAGGAGTCAAGCGAGGAGGAAAGGGAGCATGCTGAGAAATTAATGGAATATCAAAACAAACGAGGTGGAAAAGTGAAGTTGCAATCCATAGTGATGCCTCTTTCTGAGTTTGACCATGAGGAAAAGGGAGATGCCCTGTATGCAATGGAACTTGCTCTGTCGTTGGAGAAGCTAACCAATGAAAAATTACTTAACTTGCACAGTGTTGCCTCAAAGAACAATGATGTGCAATTGGCAGATTTTATTGAAAGCGAGTTTTTGGGTGAACAGGTGGAAGCCATAAAAAAAATCTCTGAGTACGTTGCTCAGCTCAGAAGAGTTGGTAAAGGACATGGTGTGTGGCACTTTGATCAGATGCTGCTGCATGAGGAGGGCGTTGCTGCTTGA 771 0.4617 MLLRTASSFSLLKANADHILPLPNSSSSGIIRYSQSLGKNLVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVAA* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1405 256 Pfam Ferritin-like domain 91 235 IPR008331 GO:0008199
Gso13g1405 256 ProSiteProfiles Ferritin-like diiron domain profile. 83 236 IPR009040 -
Gso13g1405 256 PANTHER FERRITIN 1 255 IPR001519 GO:0006826|GO:0006879|GO:0008199
Gso13g1405 256 SUPERFAMILY Ferritin-like 77 250 IPR009078 -
Gso13g1405 256 ProSitePatterns Ferritin iron-binding regions signature 2. 203 223 IPR014034 -
Gso13g1405 256 Gene3D - 52 253 IPR012347 -
Gso13g1405 256 Coils Coil 128 149 - -
Gso13g1405 256 CDD Euk_Ferritin 87 246 - -
Gso13g1405 256 PANTHER FERRITIN-2, CHLOROPLASTIC 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1405 Gso-Chr13 29558062 29560497 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1405 K00522 - gmx:547476 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0216 18 1867267 1870402 Gso13g1405 13 29558062 29560497 GST
Gso13g1405 13 29558062 29560497 Gso14g0480 14 4567205 4570067 PCT
Gso13g1405 13 29558062 29560497 Gso2g2230 2 46999763 47002030 PCT
Gso14g0480 14 4567205 4570067 Gso13g1405 13 29558062 29560497 PCT
Gso2g2230 2 46999763 47002030 Gso13g1405 13 29558062 29560497 PCT