Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2187 ATGACTTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGCGACGGCGGTTCAAGCTGGCGCTGGCGGAGGCGCCGTCGGAGATCAAGACCCTCTTCGAGGAGTACTCCGAGAATGAGTTCATGACACCTTCGCATCTCAAAAGGTTTCTCGTGGAAGTGCAAAGGCAAGAGAAGGCCACCGAAGAAGACGCGCAAGCCATCATCGACAGCTTCAGGCATTTCCCTCGCAGAGGCGCTGGCCTCAATCTCGAAACTTTCTTCAAGTACCTCTTCAGTGACGATAACCCCCCTCTTCTTCCTTCTCATGGGGTGCATCATGATATGACTTTACCCTTGTCACATTATTTCATATATACAGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGACGTCCCGATCATAAATGCACTGAAGAGAGGTGTGCGGGTGATTGAATTGGACATATGGCCTAATGCATCAAAGGATAACATAGATGTTCTTCATGGAAGGACATTGACTACTCCTGTAGAGCTCATAAGATGTTTGAGGTCTATTAAGGATCATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACGCCAGATCTCCAGGCTAAAGTGGCTGAGATGGTTACTGAAACATTTGGAGACATACTATTTACTCCTAACTCAGAAAGTGTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAAGAGAATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAAAGGAAAAAGGGGATGATTCACAGCACGAAAAGGAGAAAGGGGATGATTCACAGCATGGAAAGGCATTAGGCGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGTACTATAGAGGATTACAAGGACTACAATGTGGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATCAGACAAGTCACATCATAATGAAGCTCCAGAATATAGACGTCTAATTGCAATTCATGCTGGGAAGCCTAAAGGTGGATTAGCAGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCCATAAATCATGGACAACAAATTGTCAGGTTTACTCAGCGGAATATACTAAGGGTGTATCCAAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAAATTTTCTATTGGAGACTGGTCCAGATGACGAGGTCTTCAATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTACTATGATTTCAAGCATACACACTTTGATCAATATTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTATAATGAAGAGAACTAAGGCAATAGAGGATAACTGGTTACCTACATGGAATGAGGTATTCGAGTTCCCTCTCACTGTTCCGGAGTTGGCGTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAGCATGCCTACCTATCTGGGAGCTTAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGGGATAAATACAACACTGTAAAGCTTCTCATGCGCTTTGAATTTATTAATAATTGA 1803 0.4359 MTSKQTYSVCFCWRRRFKLALAEAPSEIKTLFEEYSENEFMTPSHLKRFLVEVQRQEKATEEDAQAIIDSFRHFPRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVELIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTETFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSQHGKALGEDEAWGKEVPSLKGGTIEDYKDYNVDEDLNDEEEFDESDKSHHNEAPEYRRLIAIHAGKPKGGLAECLKVDPDKVRRLSLSEQQLEKAAINHGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQACLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFEFINN* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2187 600 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2187 600 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 600 - -
Gso2g2187 600 Gene3D - 22 102 - -
Gso2g2187 600 Gene3D Phosphatidylinositol (PI) phosphodiesterase 103 463 IPR017946 GO:0006629|GO:0008081
Gso2g2187 600 PRINTS Phospholipase C signature 111 129 IPR001192 GO:0035556
Gso2g2187 600 PRINTS Phospholipase C signature 137 157 IPR001192 GO:0035556
Gso2g2187 600 PRINTS Phospholipase C signature 234 251 IPR001192 GO:0035556
Gso2g2187 600 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Gso2g2187 600 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Gso2g2187 600 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Gso2g2187 600 SMART C2_3c 470 578 IPR000008 -
Gso2g2187 600 CDD PI-PLCc_plant 105 437 - -
Gso2g2187 600 Pfam Phosphatidylinositol-specific phospholipase C, X domain 108 250 IPR000909 -
Gso2g2187 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 598 IPR035892 -
Gso2g2187 600 MobiDBLite consensus disorder prediction 253 292 - -
Gso2g2187 600 SMART plcx_3 106 250 IPR000909 -
Gso2g2187 600 Gene3D C2 domain 465 600 IPR035892 -
Gso2g2187 600 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 94 IPR015359 -
Gso2g2187 600 ProSiteProfiles C2 domain profile. 451 580 IPR000008 -
Gso2g2187 600 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 600 IPR001192 GO:0035556
Gso2g2187 600 Pfam C2 domain 471 571 IPR000008 -
Gso2g2187 600 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2187 600 CDD C2_PLC_like 468 597 - -
Gso2g2187 600 SUPERFAMILY PLC-like phosphodiesterases 106 451 IPR017946 GO:0006629|GO:0008081
Gso2g2187 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 106 250 - -
Gso2g2187 600 SUPERFAMILY EF-hand 17 108 IPR011992 -
Gso2g2187 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso2g2187 600 MobiDBLite consensus disorder prediction 253 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2187 Gso-Chr2 46544940 46550017 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2187 3 598 Acyl Lipid Metabolism Gene Families AT3G55940 66.392 0.0 817
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2187 K05857 - gmx:100037460 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0502 14 4813256 4818171 Gso2g2187 2 46544940 46550017 GST
Gso18g0241 18 2096393 2101105 Gso2g2187 2 46544940 46550017 PCT
Gso13g1378 13 29292943 29297889 Gso2g2187 2 46544940 46550017 PCT
Gso2g2187 2 46544940 46550017 Gso18g0241 18 2096393 2101105 PCT
Gso2g2187 2 46544940 46550017 Gso13g1378 13 29292943 29297889 PCT