Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0502 ATGACGTCGAAACAGACATACAGCGTGTGCTTCTGCTGGCGGCGGCGGTTCAAGCTGGCGCTGGCGGAGGCGCCGTCGGAAATCAAGACCCTATTCAATGAGTACTCCGAGAATGAGCTCATGACACCTTCGCATCTTAAGAGATTCCTGGTCGATGTGCAGAGGCAAGAGAAGGCCACTGAAGAAGACGCGCAAGCCATCATCGATAGCTTCAGGCATTTCCATCGCAGAGGCGCTGGCCTCAATCTCGAAACTTTCTTCAAGTACCTCTTCAGTGACGATAATCCTCCTCTTCTTCCTTCTCATGGGGTGCACCATGATATGACTTTACCCTTGTCACATTATTTCATATATACTGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGACGTCCCCATCATAAATGCACTGAAGAAAGGTGTGCGGGTGATTGAATTAGACATATGGCCTAATGCATCAAAGGATAGTATAGATGTTCTTCATGGAAGGACATTGACTACTCCTGTAGAGCTTATCAGATGTTTGAGGTCTATTAAGGATCATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCAGATCTTCAGGCTAAAGTGGCTGAGATGGTTACCCAAACATTTGGAGACATACTATTTACTCCTAACTCAGAAAGTGTGAAGGAATTCCCTTCTCCTGAATCACTTAAGAAGAGAATTATTATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAAAGGAAAAAGGGGATGATTCACAGCACGAAAAGGAGAAAGGGGATGATTCAGAGCATGGAAAGGCATCAGGTGAAGATGAAGCTTGGGGGAAGGAAGTCCCAAGCTTGAAAGGTGGTACTATAGAGGATTACAAGGACAACAACGTGGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATCAGACAAGTCACATCATAATGAAGCTCCAGAATATAGACACCTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGATTAGTGGAATGCCTCAAAGTGGATCCTGAAAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATTATGGACAACAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTGTATCCAAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAATATGCAGGGGTATGGGAGATCTCTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGCGGTTATGTTAAAAAACCAAATTTTCTATTGGAGACTGGTCCAGATGACGAGGTCTTCAATCCTAAAGCTAAGTTACCTGTGAAGACTACTTTGAAGGTGACTGTATATATGGGGGAAGGATGGTACTATGATTTCAAGCATACACACTTTGATCAATATTCACCTCCAGACTTCTACACAAGAGTGGGGATTGCTGGAGTCCCTAATGATACTATAATGAAGAGAACTAAGGCAATAGAGGATAATTGGTTACCTACATGGAATGAGGCATTTGAGTTCCCTCTCACTGTTCCGGAGTTGGCCTTGCTTCGCGTAGAAGTTCACGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCTGGGAGCTTAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGAGATAAATACAACACTGTAAAGCTTCTCATGCGCTTTGAGTTTATTAATAATTGA 1803 0.4326 MTSKQTYSVCFCWRRRFKLALAEAPSEIKTLFNEYSENELMTPSHLKRFLVDVQRQEKATEEDAQAIIDSFRHFHRRGAGLNLETFFKYLFSDDNPPLLPSHGVHHDMTLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKKGVRVIELDIWPNASKDSIDVLHGRTLTTPVELIRCLRSIKDHAFVASEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFTPNSESVKEFPSPESLKKRIIISTKPPKEYLEAKEKEKGDDSQHEKEKGDDSEHGKASGEDEAWGKEVPSLKGGTIEDYKDNNVDEDLNDEEEFDESDKSHHNEAPEYRHLIAIHAGKPKGGLVECLKVDPEKVRRLSLSEQQLEKAAINYGQQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPNFLLETGPDDEVFNPKAKLPVKTTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTKAIEDNWLPTWNEAFEFPLTVPELALLRVEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNTVKLLMRFEFINN* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0502 600 MobiDBLite consensus disorder prediction 252 292 - -
Gso14g0502 600 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 1 600 - -
Gso14g0502 600 Gene3D C2 domain 465 600 IPR035892 -
Gso14g0502 600 MobiDBLite consensus disorder prediction 252 308 - -
Gso14g0502 600 SMART C2_3c 470 578 IPR000008 -
Gso14g0502 600 CDD PI-PLCc_plant 105 437 - -
Gso14g0502 600 Pfam C2 domain 471 571 IPR000008 -
Gso14g0502 600 ProSiteProfiles C2 domain profile. 451 580 IPR000008 -
Gso14g0502 600 Pfam Phosphatidylinositol-specific phospholipase C, X domain 108 250 IPR000909 -
Gso14g0502 600 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 362 448 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0502 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 106 250 - -
Gso14g0502 600 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 470 598 IPR035892 -
Gso14g0502 600 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 363 449 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0502 600 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 94 IPR015359 -
Gso14g0502 600 Gene3D - 22 102 - -
Gso14g0502 600 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 1 600 IPR001192 GO:0035556
Gso14g0502 600 SMART plcy_3 333 450 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Gso14g0502 600 CDD C2_PLC_like 468 597 - -
Gso14g0502 600 SUPERFAMILY EF-hand 17 108 IPR011992 -
Gso14g0502 600 PRINTS Phospholipase C signature 111 129 IPR001192 GO:0035556
Gso14g0502 600 PRINTS Phospholipase C signature 137 157 IPR001192 GO:0035556
Gso14g0502 600 PRINTS Phospholipase C signature 234 251 IPR001192 GO:0035556
Gso14g0502 600 PRINTS Phospholipase C signature 388 409 IPR001192 GO:0035556
Gso14g0502 600 PRINTS Phospholipase C signature 409 427 IPR001192 GO:0035556
Gso14g0502 600 PRINTS Phospholipase C signature 564 574 IPR001192 GO:0035556
Gso14g0502 600 SMART plcx_3 106 250 IPR000909 -
Gso14g0502 600 Gene3D Phosphatidylinositol (PI) phosphodiesterase 103 463 IPR017946 GO:0006629|GO:0008081
Gso14g0502 600 SUPERFAMILY PLC-like phosphodiesterases 106 451 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0502 Gso-Chr14 4813256 4818171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso14g0502 3 598 Acyl Lipid Metabolism Gene Families AT3G55940 67.720 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0502 K05857 - gmx:547864 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0502 14 4813256 4818171 Gso2g2187 2 46544940 46550017 GST
Gso18g0241 18 2096393 2101105 Gso14g0502 14 4813256 4818171 PCT
Gso13g1378 13 29292943 29297889 Gso14g0502 14 4813256 4818171 PCT
Gso14g0502 14 4813256 4818171 Gso18g0241 18 2096393 2101105 PCT
Gso14g0502 14 4813256 4818171 Gso13g1378 13 29292943 29297889 PCT