Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2176 ATGTTACCCCAGAAGCAAGGTGAAGAAACCATAATGTCAAACCTTAACGAAACAACGATCGAGCGTGGTGAAGAGAGAGAGGAAGAGAACGTGGGTGGTGGTGGTGGTGGTTCACATTCCAGTTTGAAAAGCATTCTCTGGCATGGTGGGTCTGCTTATGATGCATGGTTCAGCTGTGCCTCAAATCAGGTTGCCCAGGTTCTACTAACACTGCCATACTCTTTTTCTCAGCTGGGAATGCTTTCTGGCATCGTATTCCAAATCTTCTATGGAATAATGGGAAGTTGGACTGCTTATCTGATTAGCATTCTGTACATCGAGTACAGGACCAGAAAAGAGAAAGAGAGTGTCAGCTTCAAAAACCATGTCATTCAGTGGTTTGAAGTGCTGGAAGGTTTACTGGGTCCATACTGGAAAGCCATTGGCTTGGCCTTCAATTGCACTTTTCTCCTCTTTGGATCCGTTATCCAGCTTATTGCTTGTGCAAGTAACATATACCTCATAAATGACCACTTGGATAAGAGGACCTGGACTTACATATTCGGAGCTTGCTGTGCCACAACAGTATTCGTACCTTCATTTCACAACTATAGAATTTGGTCTTTCCTTGGCCTTGGCATGACCACTTACACAGCTTGGTACATGACCATTGCAGCCATTGCTCATGGCCAGGTTGAAAATGTGATTCACACTGGCCCAAAAAAATTGGTATTGTATTTCACGGGAGCCACCAACATTCTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAACCTCAAAAGTTCAAATATATCTATCTTTATGCTACCCTTTATGTATTCACACTCACCATACCATCTTCTGTTGCCGTTTACTGGGCCTTTGGTGACGAACTCCTGGACCACTCCAATGCTTTCTCTATTCTTCCCCGCTCTGGTTGGCGCGATACCGCTGTCATCTTAATGCTCATTCATCAGTTCATCACTTTTGGATTTGCTTGCACACCATTGTATTTTGTGTGGGAGAAAGTGATAAAAATGCATGACACAAAGAGCCTATGTTTGAGGGCACTTGCTAGGTTGCCTGTGGTGATACCAATATGGTTTTTTGCTATTATTTTCCCTTTCTTTGGTCCTATTAACTCTGCTGTGGGGGCTCTTCTGGTTACCTTCACCGTCTATGTCATCCCTGCTTCTGCTCATATGCTCACTTACAAATCTGCTTCTGCCCGACAGAATGCTGTTGAGAAATTACCCTTCTTCATCCCAAATTGGACAACAATGTATTTGGTGAATGCATTTGTGGTGGTGTGGGTTCTAGTGGTTGGATTTGGATTTGGAGGGTGGGCTAGCATGACAAACTTCGTCAAACAGGTTGACACATTTGGACTCTTTGCCAAGTGCTACCAGTGCCCGCCAAAACTCCCAGCTTCCAACAACACAAAGCTGCATCATTGA 1458 0.4458 MLPQKQGEETIMSNLNETTIERGEEREEENVGGGGGGSHSSLKSILWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVFQIFYGIMGSWTAYLISILYIEYRTRKEKESVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYLINDHLDKRTWTYIFGACCATTVFVPSFHNYRIWSFLGLGMTTYTAWYMTIAAIAHGQVENVIHTGPKKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATLYVFTLTIPSSVAVYWAFGDELLDHSNAFSILPRSGWRDTAVILMLIHQFITFGFACTPLYFVWEKVIKMHDTKSLCLRALARLPVVIPIWFFAIIFPFFGPINSAVGALLVTFTVYVIPASAHMLTYKSASARQNAVEKLPFFIPNWTTMYLVNAFVVVWVLVVGFGFGGWASMTNFVKQVDTFGLFAKCYQCPPKLPASNNTKLHH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2176 485 PANTHER OS05G0424000 PROTEIN-RELATED 2 474 - -
Gso2g2176 485 Pfam Transmembrane amino acid transporter protein 48 441 IPR013057 -
Gso2g2176 485 PANTHER AUXIN INFLUX TRANSPORTER 2 474 - -
Gso2g2176 485 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2176 Gso-Chr2 46432588 46437840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2176 20 471 Organic Solute Cotransporters AT2G21050 76.573 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2176 K13946 - gmx:100778259 916.376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0515 14 4929983 4935173 Gso2g2176 2 46432588 46437840 GST
Gso18g0258 18 2250825 2256574 Gso2g2176 2 46432588 46437840 PCT
Gso13g1361 13 29125319 29130384 Gso2g2176 2 46432588 46437840 PCT
Gso2g2176 2 46432588 46437840 Gso18g0258 18 2250825 2256574 PCT
Gso2g2176 2 46432588 46437840 Gso13g1361 13 29125319 29130384 PCT