Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0258 ATGTTACCTCAAAAGCAAGCTGAAGAAGCCATGATGTCAAGCCTCACCCAAACGATGGAGCGTGAGGAGGGAGAGGAAGTGAAAGGGGAGACCTCACAGTTTAGCTTTAAAAATGCTCTCTGGCATGGTGGTTCTGCCTATGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCTCAGGTTCTGTTGACTCTGCCTTACTCATTCTCTCAGCTGGGAATGCTTTCAGGCATCATATTCCAAGTGTTCTATGGCTTGCTTGGGAGTTATACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTGCTGGGTCCATACTGGAAAGCTATTGGATTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTCATAGCTTGTGCAAGTAATATATATTACATTAATGATCACTTGGACAAGAGGACTTGGACCTACATATTTGGAGCTTGCTGTGCCACCACAGTGTTCATTCCATCATTCCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACCTACACTGCATGGTATTTGACCATTGCAGCCCTTGTTCATGGACAGGTTGAAAATGTGACGCATTCGGCCCCAAATAAGATGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATATATATATCTTTATGCAACAGTTTATGTGTTCACCCTCACTCTACCATCTGCTATTGCCGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCATTCCAATGCCTTCTCGCTCCTCCCTCGCTCTGGCTGGCGTGACACTGGTGTCATCCTAATGCTCATTCACCAGTTCATCACATTTGGGTTTGCTTGTACGCCATTGTATTTCGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTGAGGGCAATAACGAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCCATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATTATCCCTGCTTCTGCTCATATGCTCACATACAGATCTGCCTCAGCAAGAAAGAATGCCGCGGAGAAATTGCCCTTCTTTATCCCTAACTGGACGGTGATGTACGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTGGTGGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATCAAGCAGGTTGACACATTCGGGCTATTTGCCAAGTGCTACCAATGCCCGCCCAAAGTTCTGCCCTCCTCCAACCACACCTTGCATCACTGA 1440 0.4632 MLPQKQAEEAMMSSLTQTMEREEGEEVKGETSQFSFKNALWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIIFQVFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAALVHGQVENVTHSAPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATVYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDTGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIFLRAITRLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYRSASARKNAAEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKVLPSSNHTLHH* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0258 479 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
Gso18g0258 479 Coils Coil 5 25 - -
Gso18g0258 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Gso18g0258 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0258 Gso-Chr18 2250825 2256574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g0258 4 465 Organic Solute Cotransporters AT2G21050 75.974 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0258 K13946 - gmx:100795466 950.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0258 18 2250825 2256574 Gso18g0258 18 2250825 2256574 ECH
Gso18g0258 18 2250825 2256574 Gso13g1361 13 29125319 29130384 GST
Gso18g0258 18 2250825 2256574 Gso14g0515 14 4929983 4935173 PCT
Gso18g0258 18 2250825 2256574 Gso2g2176 2 46432588 46437840 PCT
Gso14g0515 14 4929983 4935173 Gso18g0258 18 2250825 2256574 PCT
Gso2g2176 2 46432588 46437840 Gso18g0258 18 2250825 2256574 PCT