Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso13g1361 ATGTTACCTCAGAAGCAAGCTGAAGAAGCCATGATGTCAAGCCTCACTCAAACGATGGAGCGGGAGGAGGGAGAGGAAGTGATAGGGGAGACCTCAAATTTTAGCTTTAAAAATGCTCTCTGGCATGGTGGTTCTGCCTACGATGCTTGGTTCAGCTGTGCCTCAAATCAGGTTGCTCAGGTTCTATTGACTCTGCCTTACTCATTCTCTCAGCTGGGAATGGTTTCAGGCATCATATTCCAAGTGTTCTATGGCTTGCTTGGGAGTTATACTGCTTATTTAATTAGCATTCTGTACATTGAGTACAGAAGCCGGAAAGAGAAAGAGAATGTCAGCTTCAAAAACCATGTCATCCAGTGGTTTGAAGTGTTGGAAGGCTTACTGGGTCCATACTGGAAAGCTATTGGGTTGGCCTTCAACTGCACTTTTCTCCTCTTTGGATCTGTCATCCAGCTCATAGCTTGTGCAAGTAATATATACTACATAAATGACCACTTGGACAAGAGGACTTGGACCTACATATTTGGAGCTTGCTGTGCCACCACAGTGTTCATCCCATCATTCCACAACTACAGGATATGGTCCTTCCTTGGTCTTGGCATGACCACCTACACTGCTTGGTATTTGACCATTGCAGCCATTGCTCATGGCCAGGTTGAAAATGTGAAGCATTCGGCCCCAAACAAGATGGTTTTGTATTTCACAGGCGCCACCAACATACTCTACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATACATATATCTTTATGCAACAGTTTATGTGTTCACCCTCACTCTACCATCTGCTATTGCCGTTTACTGGGCCTTTGGTGACCAACTTTTGGATCATTCCAATGCCTTCTCGCTCCTCCCTCGCTCTGGCTGGCGTGACATCGGTGTCATCCTAATGCTCATTCACCAGTTCATCACATTCGGGTTTGCTTGTACGCCATTGTATTTCGTGTGGGAGAAAGTGATAGGAATGCATGACACAAAGAGCATATTTTTTAGGGCACTAGCGAGGTTACCTGTGGTGATACCAATATGGTTTTTGGCCATTATTTTCCCTTTCTTTGGGCCCATTAATTCAGCTGTGGGGGCCCTTTTGGTCAGCTTCACCGTTTACATCATCCCTGCTTCTGCTCATATGCTCACATACAGATCTGCCTCAGCAAGACAGAATGCCGCGGAGAAATTGCCCTTCTTTATCCCTAACTGGACGGTGATGTACGTGGTGAATGCATTTGTGGTGGTGTGGGTTCTGGTAGTGGGCTTTGGGTTTGGAGGGTGGGCCAGCATGACAAATTTCATCAAGCAGGTTGACACATTCGGGCTATTTGCCAAGTGCTACCAATGCCCACCCAAAGGCCCCCCCTCCTCCAACCACACCTTGCATAACTGA 1440 0.4688 MLPQKQAEEAMMSSLTQTMEREEGEEVIGETSNFSFKNALWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMVSGIIFQVFYGLLGSYTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLEGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDHLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAIAHGQVENVKHSAPNKMVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLYATVYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLLPRSGWRDIGVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSIFFRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPASAHMLTYRSASARQNAAEKLPFFIPNWTVMYVVNAFVVVWVLVVGFGFGGWASMTNFIKQVDTFGLFAKCYQCPPKGPPSSNHTLHN* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso13g1361 479 Pfam Transmembrane amino acid transporter protein 42 435 IPR013057 -
Gso13g1361 479 PANTHER AUXIN INFLUX TRANSPORTER 2 468 - -
Gso13g1361 479 Coils Coil 5 25 - -
Gso13g1361 479 PANTHER OS05G0424000 PROTEIN-RELATED 2 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso13g1361 Gso-Chr13 29125319 29130384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso13g1361 4 465 Organic Solute Cotransporters AT2G21050 76.840 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso13g1361 K13946 - gmx:100792491 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0258 18 2250825 2256574 Gso13g1361 13 29125319 29130384 GST
Gso13g1361 13 29125319 29130384 Gso14g0515 14 4929983 4935173 PCT
Gso13g1361 13 29125319 29130384 Gso2g2176 2 46432588 46437840 PCT
Gso14g0515 14 4929983 4935173 Gso13g1361 13 29125319 29130384 PCT
Gso2g2176 2 46432588 46437840 Gso13g1361 13 29125319 29130384 PCT