Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2099 ATGAGGGAGGGACAGGATCATGTTCCAAAGTTTAGGTCGACTGTGTGGGTGACTGAGATGGGTTACGCTTCCCAATCCACATTTTCCCAGAAAAAAGCTGCTGAACAGGATGCTGCTAGAGTTGCTTTGGAAGGTATGCTTCAGAGGACCAGAGATGAAGGACTCTCTCTTGTCAATCAGCAGATTTCTCCATTTTCCAAGTCTATCATGAATGAGTATGCTGATAAACTGCATGTGCAACCTACATATGACACCGTTCAGGAACAGCTAGGAGGGGTGCTTCGTGTTTTTAAAACTTCTTTAGTTTTCAATGGTACAAGTTACACCGGTGATCCAGCTAGAACAAAAAAGGAAGCTGAGCAGTCAGCCACAAAGGCTGCTATTCTTTCCATTATGGGTGATTCTACCTCAGGAACTACACTCATTGAGATTATTAAGTCAAAGTCTACATTTTATGATGCAATCAAAGGAAAGGGACCACCTCTGTTACAGCCTAGTGCAGTGTTATCCACAACAAATACAGGACAGATCTCTGTTACACTGGGTCATAGAGATACAGGAGTTACAGCTTCCGTGCTTGATAATAATAATAATAATAAGAATATTGAAGCTAAAGTTGAATTTCCTGAGTCTTCTAAGATGCTTTCCACATGTCAAGAACTCCAAATGATAAAACAAGAATCTTCCCTTGAAGCCAATAATGTGTCTTTGCAACCAGGTTCAGAACATTCCATTGATAATAGTTCAACTTCAAAAAAGCGGAAAAAGAACAAGAAGAAGTCTAATAATAAGAAGTTACGGTTGGAGACTCCGCCGTTACCAATTACTGCAGTTTCTCTGAACCAAGTCCCTCCTTGTACTGCAGTTCTCATTAATCAAGTCCCTCCTTGTTCTGCAGTACCCATGAACCAAGTTCCTCCTTTTACTGCAGTTCCCATGAGCCAAGTCCCTCCATGA 957 0.4138 MREGQDHVPKFRSTVWVTEMGYASQSTFSQKKAAEQDAARVALEGMLQRTRDEGLSLVNQQISPFSKSIMNEYADKLHVQPTYDTVQEQLGGVLRVFKTSLVFNGTSYTGDPARTKKEAEQSATKAAILSIMGDSTSGTTLIEIIKSKSTFYDAIKGKGPPLLQPSAVLSTTNTGQISVTLGHRDTGVTASVLDNNNNNKNIEAKVEFPESSKMLSTCQELQMIKQESSLEANNVSLQPGSEHSIDNSSTSKKRKKNKKKSNNKKLRLETPPLPITAVSLNQVPPCTAVLINQVPPCSAVPMNQVPPFTAVPMSQVPP* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2099 318 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 65 133 IPR014720 -
Gso2g2099 318 SUPERFAMILY dsRNA-binding domain-like 4 46 - -
Gso2g2099 318 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 48 IPR014720 -
Gso2g2099 318 SUPERFAMILY dsRNA-binding domain-like 66 146 - -
Gso2g2099 318 Gene3D - 61 131 - -
Gso2g2099 318 Gene3D - 1 46 - -
Gso2g2099 318 SMART DRBM_3 66 132 IPR014720 -
Gso2g2099 318 PANTHER RIBONUCLEASE III 2 262 IPR011907 GO:0003723|GO:0004525|GO:0006364
Gso2g2099 318 Pfam Double-stranded RNA binding motif 67 128 IPR014720 -
Gso2g2099 318 Pfam Double-stranded RNA binding motif 3 44 IPR014720 -
Gso2g2099 318 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 2 262 - -
Gso2g2099 318 MobiDBLite consensus disorder prediction 235 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2099 Gso-Chr2 45593902 45599677 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2099 - - gsj:114398274 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0598 14 5848417 5853266 Gso2g2099 2 45593902 45599677 GST
Gso2g2099 2 45593902 45599677 Gso13g1270 13 27991991 27995795 PCT