Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso14g0598 ATGGCTTTGTCTTCTTCTGAGCCTCCTCCACCTTCAGTTCCTGCTCCCGTTCAATCTAACCCTCCTCCACACTTGATGTACAAAAATCGTTTACAAGAGTTTACTTCAAAGTCAGGCATTAACTTTCCTGTGTATCAGACCATTAATGAGGGACAGGATCATAGTCCAAAATTTAGGTCGACTGTGTGGGTCGCTGATATGGGTTACACTTCCCAATCCACATTTTCCCATAAAAAAGCTGCTGAGCAGGAGGCAGCTAGACTTGCTTTGGAAAGTATCCTTAAGAGGACCAGAGATGAAGGACTCTCTCTTGTCAATCAGATTTCTCCATTTTCCAAGTCTATCATGAATGAGTACGCTGACAAACTGCATGTAGAACAACCTACATACAACACTGATCAGCAACAGCTAGGAGGGGTGCTTCCTATCTTTATAACTTCTTTAGTTTTCAATGGTACAAGTTACACTGGTGATCCAGCTAGAACAAAAAAGGAAGCTGAGCAGTCAGCCGCAAAGGCTGCAATTCTTTCAATTATGGGTGATTCTAGCTCGGGAACTGTGCTTGTTGAGATTATTAAGTCAAAGTCTATATTTTATGATGCAATCAAAGGAAAGGGACGATCTCTGTCACAGCCTAGTGCAGTGTTATCCACAACAAATGCAGGACAGATCTCTATTACACTGGATCATAAAGATACAGAAGTTGCAGCTTGTGTGGCTGATAATAATAATAATGAGACTAAAGTTGAATTTCCTGAGTTTCCTAAGATGCTTTCCACATGTCAAGAACTCCAAATGATACATCAAGAATCTTCCCTTGAAGCCAATAATGTCTCTTTGCAGCCGGGTTCAGAACATTCCATTGATAATGATTCAACTTCAAAAAAGCGGAAAAAGAACAAGAAGAAGTCTAATAAGAAGTTACGGTCACAGACTCCGCTGTCACCGATTACTGGGGTTCCCTTGAACCAAGTCCCTCCACGTACTGGAGTTCTCATGAACCAAGTTACTCCTTGTTCTACATTTCTCATGAACCAAGTTCCTCCTTGTACTGCTGTTCCCATGAACCAAGTTCCTCCTTGTACTGCAGTTCCCATGAGCCAACTTTATGCTCGTACTTCTCTCATGGACCAAGTCCCTCCTCGTACAGCTCCCATGAACCAAGTTATGCCGTGTACTGCAGCTCCCATGGACCAAGGTCCTCCTCGTACTGCAGCTCCCATGAACCAAGTTCCACCGTGTAGTGCATTTCCCATGATTCAAGTCGCTCCTTGTACTTCAGCTACTGCAGCTCCGATGAACCAAGTTCCCCCTGCAGCTCCGATGAACCAAGTTCCCCCTTGCACTGCAGCTTCCATGAACAAAGTCCCTCTTTTATAG 1380 0.4384 MALSSSEPPPPSVPAPVQSNPPPHLMYKNRLQEFTSKSGINFPVYQTINEGQDHSPKFRSTVWVADMGYTSQSTFSHKKAAEQEAARLALESILKRTRDEGLSLVNQISPFSKSIMNEYADKLHVEQPTYNTDQQQLGGVLPIFITSLVFNGTSYTGDPARTKKEAEQSAAKAAILSIMGDSSSGTVLVEIIKSKSIFYDAIKGKGRSLSQPSAVLSTTNAGQISITLDHKDTEVAACVADNNNNETKVEFPEFPKMLSTCQELQMIHQESSLEANNVSLQPGSEHSIDNDSTSKKRKKNKKKSNKKLRSQTPLSPITGVPLNQVPPRTGVLMNQVTPCSTFLMNQVPPCTAVPMNQVPPCTAVPMSQLYARTSLMDQVPPRTAPMNQVMPCTAAPMDQGPPRTAAPMNQVPPCSAFPMIQVAPCTSATAAPMNQVPPAAPMNQVPPCTAASMNKVPLL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso14g0598 459 SUPERFAMILY dsRNA-binding domain-like 21 93 - -
Gso14g0598 459 MobiDBLite consensus disorder prediction 7 21 - -
Gso14g0598 459 SUPERFAMILY dsRNA-binding domain-like 112 193 - -
Gso14g0598 459 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 3 305 - -
Gso14g0598 459 MobiDBLite consensus disorder prediction 278 322 - -
Gso14g0598 459 PANTHER RIBONUCLEASE III 3 305 IPR011907 GO:0003723|GO:0004525|GO:0006364
Gso14g0598 459 SMART DRBM_3 112 179 IPR014720 -
Gso14g0598 459 SMART DRBM_3 27 94 IPR014720 -
Gso14g0598 459 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 111 180 IPR014720 -
Gso14g0598 459 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 26 95 IPR014720 -
Gso14g0598 459 MobiDBLite consensus disorder prediction 1 23 - -
Gso14g0598 459 Gene3D - 109 179 - -
Gso14g0598 459 Gene3D - 23 95 - -
Gso14g0598 459 Pfam Double-stranded RNA binding motif 27 91 IPR014720 -
Gso14g0598 459 Pfam Double-stranded RNA binding motif 113 175 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso14g0598 Gso-Chr14 5848417 5853266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso14g0598 - - gmx:100798730 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0598 14 5848417 5853266 Gso2g2099 2 45593902 45599677 GST
Gso14g0598 14 5848417 5853266 Gso13g1270 13 27991991 27995795 PCT