Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2080 ATGGTGGCTTTGGTTTCTCAAGAAAACGTTGTTGCATTGGTTTCTCGTACGGGTAGGGAGTTGCAACGCTATAGAAAGGGTCGTCGCCAAGTCGTGGGATGCATACCATACAGATATAAAATTGGTGATCAAACTTCCTTGGACGCACAAGAAGAATTAGAAGTTTTGGTTATCACTTCTCAGAAAGGCAAAGGGATGCTATTTCCTAAGGGAGGGTGGGAATTGGACGAATCCAAAAAGGAGGCAGCTTTGCGAGAAACCATAGAGGAAGCAGGGGTGCGAGGCACTGTTGAGGGTAAATTGGGCAAGTGGAGTTTCAAGAGCAAGACACATGATACATTTTATGAAGGCTACATGTTCCCTCTACTTGTTCAAGAGCAATTGGAGTTGTGGCCCGAACAGAATGTTCGTCAAAGAATATGGATGAGCATTTCTGAAGCAAGGGAAGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGAGAGACTAGTAAACCGGAAACTTGGTCGTGTGAGACAAATAGAAATAGTAGGTTCTATACATTGCATAGGAGATGGCAATTCTGACTTGTAA 573 0.438 MVALVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRYKIGDQTSLDAQEELEVLVITSQKGKGMLFPKGGWELDESKKEAALRETIEEAGVRGTVEGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLELWPEQNVRQRIWMSISEAREVCQHWWMKEALERLVNRKLGRVRQIEIVGSIHCIGDGNSDL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2080 190 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
Gso2g2080 190 SUPERFAMILY Nudix 19 168 IPR015797 -
Gso2g2080 190 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Gso2g2080 190 CDD Nudix_Hydrolase_9 30 157 - -
Gso2g2080 190 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 187 - -
Gso2g2080 190 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 187 - -
Gso2g2080 190 Pfam NUDIX domain 50 162 IPR000086 -
Gso2g2080 190 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2080 Gso-Chr2 45397629 45399467 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2080 K07766 - gmx:100305863 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1802 14 50365417 50367596 Gso2g2080 2 45397629 45399467 GST
Gso18g0362 18 3488080 3490217 Gso2g2080 2 45397629 45399467 PCT
Gso13g1253 13 27722086 27723983 Gso2g2080 2 45397629 45399467 PCT
Gso2g2080 2 45397629 45399467 Gso18g0362 18 3488080 3490217 PCT
Gso2g2080 2 45397629 45399467 Gso13g1253 13 27722086 27723983 PCT