Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g0362 ATGGTGGCTGTGGTTTCCCAAGAAAATGTTGTGGCATTGGTTTCTCGTACCGGTAGGGAGTTGCAACGTTATAGAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCGTACAGATTTAAGATTGGGGAGAAGACTTGCTTGGATGTTTCTGATGAATTGGAAGTTCTGGTTATTAGTTCTCAGAAAGGAAAAGGGATGCTATTCCCAAAGGGAGGCTGGGAATTAGACGAATCAAAAAAGGAGGCAGCTTTGAGAGAAACCATGGAGGAAGCTGGGGTGCGAGGCATTGTTGGGGGTAAATTGGGTAAATGGAGTTTCAAGAGCAAGACTCATGACACTTTCTATGAAGGCTACATGTTCCCTTTGCTTGTTCAAGAGCAATTGGAGTTCTGGCCAGAGCAAAACGTTCGTCAAAGAATATGGATGAGCGTCACAGAAGCAAGGGAAGTTTGTCAACACTGGTGGATGAAGGAAGCTCTAGACAGACTTGTAAATCGTCTCTCGGGTCAAAAACAACTTGGTCATCATCGTGATAATAATAAGCAAGTTCTTGGTTCTATAAACTGCAAAGGAGATGCCAAATCTGACTTGTGTAAATAG 600 0.4367 MVAVVSQENVVALVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKTCLDVSDELEVLVISSQKGKGMLFPKGGWELDESKKEAALRETMEEAGVRGIVGGKLGKWSFKSKTHDTFYEGYMFPLLVQEQLEFWPEQNVRQRIWMSVTEAREVCQHWWMKEALDRLVNRLSGQKQLGHHRDNNKQVLGSINCKGDAKSDLCK* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g0362 199 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Gso18g0362 199 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 173 - -
Gso18g0362 199 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Gso18g0362 199 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 173 - -
Gso18g0362 199 CDD Nudix_Hydrolase_9 30 157 - -
Gso18g0362 199 SUPERFAMILY Nudix 21 167 IPR015797 -
Gso18g0362 199 Pfam NUDIX domain 51 161 IPR000086 -
Gso18g0362 199 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 14 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g0362 Gso-Chr18 3488080 3490217 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g0362 K07766 - gmx:100795999 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g0362 18 3488080 3490217 Gso13g1253 13 27722086 27723983 GST
Gso18g0362 18 3488080 3490217 Gso14g1802 14 50365417 50367596 PCT
Gso18g0362 18 3488080 3490217 Gso2g2080 2 45397629 45399467 PCT
Gso14g1802 14 50365417 50367596 Gso18g0362 18 3488080 3490217 PCT
Gso2g2080 2 45397629 45399467 Gso18g0362 18 3488080 3490217 PCT