Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1590 ATGGGATTAGTCAGTAATGAATACTCAAATGGATCTGTTCAGAGCTGCAATGGATTAGAGGAGAAGCTTGATGATCTTCGCGGCCTTGTTGGCAAGGCTGATGGTGATCCTTTGAGAATAGTGAGTGTTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCAGCTTTGCTGCAAGATACTTATGGCCAATTCCGCGACAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCCACTGCAGAGCACCTCTTTGAAGTTATCAACTCAAGGGAGGATGTGTTGAGGAGATTGATCAGGCGCTGCGCTTATCTGAAATATGTTGAGGCTAGACTTGGTGACAGGACTCTTCTGGCTGATGAGATTCTGAAGGATGGGTTTTGCTTGAATATGATTGACACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGACATTGTAGTTAATGGTTTGCCTTCAACCGAAACACGGGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAGAGAATCACAGTGCCAGTGATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTAGAGCCTGTTCCCCATATTATAACCCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTGTATCTTGGTGGTCCAAATATTGCCTCAGAAATATACAACAAGGAGTATGCCAATGCCCGAATTTGCGGAGATGAGAAATGGAGAAAACCTCTTGCAAAGTTTCTACGACAACCACATTTTATTGTCTGGGACAACAGTGACCTTGTCACCCATGAGGTCATGGGTGGCTTGAAAAATGTCTATGCAATTGGTGCAGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACCAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATATTTATCACTCATTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCACTATTGGCTGACACTTATGTGACTTTACTAAAAGGTCGTAACGCATGGTATGGTCAGATGTTAGCTAAGGGTGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTGGAGGCATTTTTTGAACTTTTGAGCCATTCAAGCCTGAATGTGTTGCATCCTGAAGAAAACAAGCCGGTTGCTCCTGTTGAACTCTGCCCCATCCTGAAGACACTGTATAAAATATTGATATCCAGGGAACAGTTATCGGAAGCTATTCTCCAAGCTCTTAGGGATGAAAATCTGAATGATCCTCGGGAACGCATTGAGATTGCACAAAGCCATGCTTTCTACATGCCTTCACTTCTTGGACAACCCTGA 1377 0.4423 MGLVSNEYSNGSVQSCNGLEEKLDDLRGLVGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKVQIRIWRRPGKTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGDEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSHSSLNVLHPEENKPVAPVELCPILKTLYKILISREQLSEAILQALRDENLNDPRERIEIAQSHAFYMPSLLGQP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1590 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 270 IPR036291 -
Gso2g1590 458 Gene3D - 21 101 - -
Gso2g1590 458 Gene3D - 270 429 IPR013328 GO:0016491
Gso2g1590 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 5 457 - -
Gso2g1590 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 5 457 - -
Gso2g1590 458 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 270 426 IPR008927 -
Gso2g1590 458 Gene3D - 130 266 - -
Gso2g1590 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 270 425 IPR006109 GO:0004367|GO:0005975
Gso2g1590 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 42 59 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gso2g1590 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 263 287 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gso2g1590 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 142 244 IPR011128 GO:0016616|GO:0046168|GO:0051287
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1590 Gso-Chr2 36114075 36120884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1590 9 458 Acyl Lipid Metabolism Gene Families AT2G41540 87.805 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1590 K00006 - gmx:100797552 915.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1590 2 36114075 36120884 Gso10g0994 10 25307444 25313510 GST
Gso19g1142 19 39640066 39644679 Gso2g1590 2 36114075 36120884 PCT
Gso3g1145 3 36822000 36826133 Gso2g1590 2 36114075 36120884 PCT
Gso2g1590 2 36114075 36120884 Gso19g1142 19 39640066 39644679 PCT
Gso2g1590 2 36114075 36120884 Gso3g1145 3 36822000 36826133 PCT