Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0994 ATGGGAGTAGTTAGTAATGAGTACTCAAATGGATCTGTTCAAGGCTGCAATAGTTTAGAGGAGAAGCTCGATGATCTTCGTGGCCTACTTGGCAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCTGCTTTGCTGCAAGATACTTATGGCCAATTCCGTGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCCACTGCAGAGCACCTCTTCGAAGTTATCAATTCTAGGGAGGATGTGTTGAGGAGGTTGATAAGGCGCTGTGCTTATCTGAAATACGTCGAAGCCAGGCTTGGTGATAGGACTCTTCTGGCTGATGAGATTTTGAAAGATGGGTTTTGCTTGAATATGATTGACACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAAGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACCGAAACACGCGAGATTTTTGAAGAGATTAGTATATATTGGAAGGAGAGAATCACAGTGCCAGTGATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCATATTATAACCCCCACAAAAATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATATACAACAAGGAGTATGCCAATGCTCGAATATGCGGAGCAGAGAAATGGAGGAAACCTCTGGCAAAGTTTCTACGACAACCACATTTTATTGTCTGGGACAACAGTGACCTTGTCACCCATGAGATCATGGGTGGCCTGAAAAATGTCTATGCAATTGGTGCCGGAATGGTAGCAGCCCTTACCAATGAGAGTGCTACTAGCAAATCTGTCTACTTTGCACACTGCACATCAGAGATGATATTTATCACTCATTTGTTGGCTGAAGAGCCTGAGAAACTTGCAGGGCCACTATTGGCTGACACTTATGTGACTTTACTAAAAGGTCGTAACGCATGGTATGGTCAGATGTTAGCTAAGGGTGAATTAAGCCCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTCTCTGCAGTGGAGGCATTCTTTGAACTTTTGAGCCATTCAAGCCTGAATGTGTTGCACCCAGAAGAAAACAAACCGGTTGCTCCTGTTGAACTCTGCCCCATCCTGAAGACACTGTATAAAATATTGATATCCAGGGAACAGTCATCAGAAGCTATTCTCCAAGCTCTTAGGGATGAAAATCTGAATGATCCCCGTGAACGCATTGAGATTGCACAAAGCCATGCTTTCTACATGCCTTCACTTCTTGGACAACCTTGA 1377 0.443 MGVVSNEYSNGSVQGCNSLEEKLDDLRGLLGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKVQIRIWRRPGKTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISIYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEIMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDSISGKGMIQGVSAVEAFFELLSHSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSEAILQALRDENLNDPRERIEIAQSHAFYMPSLLGQP* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0994 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE [NAD(+)] 9 458 - -
Gso10g0994 458 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 270 IPR036291 -
Gso10g0994 458 Gene3D - 130 266 - -
Gso10g0994 458 Gene3D - 270 430 IPR013328 GO:0016491
Gso10g0994 458 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 270 425 IPR008927 -
Gso10g0994 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 142 244 IPR011128 GO:0016616|GO:0046168|GO:0051287
Gso10g0994 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 42 59 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gso10g0994 458 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 263 287 IPR006168 GO:0004367|GO:0006072|GO:0009331
Gso10g0994 458 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 270 424 IPR006109 GO:0004367|GO:0005975
Gso10g0994 458 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 9 458 - -
Gso10g0994 458 Gene3D - 21 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0994 Gso-Chr10 25307444 25313510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso10g0994 9 458 Acyl Lipid Metabolism Gene Families AT2G41540 88.274 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0994 K00006 - gmx:100794592 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1590 2 36114075 36120884 Gso10g0994 10 25307444 25313510 GST
Gso19g1142 19 39640066 39644679 Gso10g0994 10 25307444 25313510 PCT
Gso3g1145 3 36822000 36826133 Gso10g0994 10 25307444 25313510 PCT
Gso10g0994 10 25307444 25313510 Gso19g1142 19 39640066 39644679 PCT
Gso10g0994 10 25307444 25313510 Gso3g1145 3 36822000 36826133 PCT