Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1584 ATGTCAGACGCGTTCTGCAGCGACTGCAAGAGGCAGACGGAGGTGGTGTTTGACCACTCTGCCGGCGACACGGTGTGCTCGGAGTGCGGCCTCGTACTGGAGTCCCACTCTATCGACGAGACCTCTGAGTGGCGTACCTTCGCCAACGAGTCCGGTGACAACGATCCCAATCGTGTCGGCGGGCCCTCCAACCCCCTCCTCACCGACGGCGGCCTCTCCACCGTCATCGCCAAGCCCAACGGCGGCGGAGGTGGCGGCGAGTTCCTCTCCTCCTCCCTCGGTCGCTGGCAGAACCGCGGCTCCAACCCTGATCGCGCCCTCATCATCGCCTTCAAGACCATCGCCACCATGTCCGACAGGTTGGGACTCGTTGCGACCATCAAGGATCGGGCAAATGAGATATATAAGAGGGTTGAAGATCAAAAGTCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGTCTCTACATCGCTTGCCGACAAGAAGACAAACCTCGTACTGTAAAGGAAATTTGCTCTGTTGCCAATGGGGCCACAAAGAAGGAAATTGGCCGAGCTAAAGAATACATAGTAAAACAACTGGGTTTGGAGAACGGTAATGCTGTGGAGATGGGTACAATACATGCAGGGGACTTCATGAGGCGATTCTGTTCTAATCTTTGTATGAATAATCAAGCTGTTAAAGCTGCTCAGGAAGCTGTGCATAAATCAGAAGAATTTGATATAAGGAGGAGTCCCATTTCAATTGCTGCAGCAGTTATATACATCATAACTCAGCTTTCTGATGATAAGAAACCTCTCAAAGATATATCACTTGCCACAGGCGTTGCAGAAGGAACGATTAGGAACTCCTACAAGGATCTTTATCCCCATGTTTCCAAAATAATACCAAATTGGTATGCTAAGGAGGAGGATTTAAAGAATCTTTGCAGCCCTTGA 945 0.5016 MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVGGPSNPLLTDGGLSTVIAKPNGGGGGGEFLSSSLGRWQNRGSNPDRALIIAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVHKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNWYAKEEDLKNLCSP* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1584 314 Gene3D - 210 313 - -
Gso2g1584 314 SMART cyclin_7 112 194 IPR013763 -
Gso2g1584 314 SMART cyclin_7 213 292 IPR013763 -
Gso2g1584 314 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 314 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 SUPERFAMILY Cyclin-like 107 198 IPR036915 -
Gso2g1584 314 CDD CYCLIN 209 291 IPR013763 -
Gso2g1584 314 PANTHER TRANSCRIPTION INITIATION FACTOR IIB-RELATED 3 314 - -
Gso2g1584 314 Pfam Transcription factor TFIIB repeat 206 292 IPR013150 GO:0017025
Gso2g1584 314 Pfam Transcription factor TFIIB repeat 105 187 IPR013150 GO:0017025
Gso2g1584 314 SUPERFAMILY Zinc beta-ribbon 4 50 - -
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 19 39 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 41 54 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 55 76 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 154 173 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 181 196 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 214 232 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 246 262 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 PRINTS Transcription initiation factor IIB signature 278 292 IPR000812 GO:0006352|GO:0070897
Gso2g1584 314 Gene3D - 5 195 - -
Gso2g1584 314 CDD CYCLIN 107 187 IPR013763 -
Gso2g1584 314 Pfam TFIIB zinc-binding 6 47 IPR013137 -
Gso2g1584 314 ProSitePatterns Transcription factor TFIIB repeat signature. 146 161 IPR023486 -
Gso2g1584 314 SUPERFAMILY Cyclin-like 209 310 IPR036915 -
Gso2g1584 314 ProSiteProfiles Zinc finger TFIIB-type profile. 2 34 IPR013137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1584 Gso-Chr2 35085564 35089841 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1584 K03124 - gmx:100790355 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1584 2 35085564 35089841 Gso10g1004 10 25697772 25702204 GST
Gso19g1149 19 39725922 39729627 Gso2g1584 2 35085564 35089841 PCT
Gso3g1152 3 36910535 36914238 Gso2g1584 2 35085564 35089841 PCT
Gso2g1584 2 35085564 35089841 Gso19g1149 19 39725922 39729627 PCT
Gso2g1584 2 35085564 35089841 Gso3g1152 3 36910535 36914238 PCT