Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1443 ATGCTGAGCGTGGTGCGCGTGCACCTGCCCTCGGAAATTCCCATTGTAGGCTGCGAGCTCACGCCCTACGTGCTCCTCCGCCGCCCCGACAAGACCGTCTCCACCGACGATGTTCCCGAAACCACACCCTTAGACGGTCATTTCCTGCGCTACAAATGGTATCGTGTACAGAATGATAAAAAAGTTGCTGTCTGTAGCATACATCCATCAGAGCAAGCCACCCTGCAATGCCTAGGCTGTGTTAAGGCCAAAATACCTGTTTCCAAGAGTTACCATTGCACCACAAAGTGTTTTTCGGATGCATGGCAGCATCATCGTGTCTTACATGATCGTGCCGCAAGTGCTCTTAATGAAAATGGAAACGAGGAGGAGGAGGTATTTGGGCGCTTTAATAGTACTGGGTCTGGGGCAACCAATTCCAGCTTATCTGCCTCTGCATCAAGTGCTAGCTTGACAAATGGGTCTGCAACACCTTTGTATCCAGCAGCTATCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTTGGACGATCCAAGACTTACACCCCTACTGCTGATGACGTTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCTGTGGGGCATGTCAACACTATACTAACTTCACGTGTCATTCCTGCTCCCTCGCCTATTCCACGCCGAATAATACCTGTTGATGGGATGGCACATTTAGATGTGGATGGGAGAATGACATCTTCAGGAACTTTTACTGTTCTATCATACAATGTATTGTCTGAAGCATATGCCTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGTTACGGGAAATTGTTGGTTACCGTCCAGACATTATTTGTCTTCAGGAGGTTCAAAGCGATCATTATGACGAATTTTTTTCTCCCGAATTAGACAAACATGGATATTATGGTCTTTACAAGAGAAAAGAGGTGTACAGTGGCAACACAAATACAATTGATGGGTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTTAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAATCTTTGACAGAGGCTACAATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTTGCCCTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCATTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTCCCCCAAGATCTAAAGGATGTGAAACTCTGGCAGGTTCATACTCTCTTAAAAGGGTTGGAAAAAATAGCTGCAAGCGCAGACATTCCGATGTTGGTTTGTGGAGATTTTAATTCAGTTCCAGGAAGTGCTCCTCATGCACTTCTTGCAATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCGCTTAACATTCTACGTCCTCACAGCAAGTTGGTTCATCAGTTACCACTGGTCAGTGCATACTCATCTTTTGCTAGAACAGTTGGCCTTGGATATGAGCAGCATAAAAGGAGAATGGATGGTGGAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTGGAGTTACTGGATGAGGAGAGTTTGAGGAAGGACACAGCACTTCCTTCACCTGAATGGTCCTCAGATCACATAGCTCTCTTAGCCGAATTTCGCTGCTGCAAGAATAAATCTAGGCGTTGA 1797 0.4402 MLSVVRVHLPSEIPIVGCELTPYVLLRRPDKTVSTDDVPETTPLDGHFLRYKWYRVQNDKKVAVCSIHPSEQATLQCLGCVKAKIPVSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSGATNSSLSASASSASLTNGSATPLYPAAITQRSGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPIPRRIIPVDGMAHLDVDGRMTSSGTFTVLSYNVLSEAYASNDLYNYCPSWALSWPYRRQNLLREIVGYRPDIICLQEVQSDHYDEFFSPELDKHGYYGLYKRKEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEQHKRRMDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1443 598 CDD Deadenylase_CCR4 252 591 - -
Gso2g1443 598 PANTHER CARBON CATABOLITE REPRESSOR-LIKE PROTEIN 36 595 - -
Gso2g1443 598 SUPERFAMILY DNase I-like 245 592 IPR036691 -
Gso2g1443 598 Gene3D Endonuclease/exonuclease/phosphatase 222 597 IPR036691 -
Gso2g1443 598 Pfam Endonuclease/Exonuclease/phosphatase family 253 582 IPR005135 GO:0003824
Gso2g1443 598 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 36 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1443 Gso-Chr2 27797314 27805605 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1443 K12603 - gmx:100819402 1130.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1720 19 46078511 46084712 Gso2g1443 2 27797314 27805605 PCT
Gso3g1750 3 43322666 43328946 Gso2g1443 2 27797314 27805605 PCT
Gso2g1443 2 27797314 27805605 Gso19g1720 19 46078511 46084712 PCT
Gso2g1443 2 27797314 27805605 Gso3g1750 3 43322666 43328946 PCT