Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1273 ATGGGAGTTGTCACTGTTGGAGAATTGAAGCCTAGCATCTCAGGGAAGAGGACCTTTCGTCCAAGCTCAAGCATAAGGCATGCCACTGAATGGCCAATATCTGATGTCTCTAGTGATCTCACCATCGAAGTAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGGATTCGGAAAATGTTGTTAGAAACAAAAGATTCAAAAGTTTCACGCATAAGTCTCCCAAACTTGCCAGGTGGTGCAGAGGCATTTGAGCTGGCTGCCAAATTCTGTTATGGAATCAATGTGGAGTTCAGTCTCTCCAATGTTGCCATGCTAAAATGTGTAGCTCATTTTCTAAAAATGACAGAAGAGTTTGCAGACAAAAACTTGGAGACGCGAGCCGAAGCATATCTAAAGGAGACAGTGCTCCCAAATATATCAAACACAATATCTGTTCTTCACCGTTGTGAATCTCTTGTTCCCATTTCAGAAGAGATTAGCCTTGTCAGCAGACTAATCAATGCAATTGCAAACAATGCATGCAAAGAACAGCTCACCACTGGTTTGCAAAAACTGGACCACAGCTTCCCTTCTAAAACCACCTCAAACATGGAACCTGAAACACCCTCAGAATGGTGGGGGAAATCTCTCAATGTTCTTAGTCTTGATTTCTTTCAAAGAGTTTTGTCTGCAGTGAAGTCAAAGGGATTAAAACAAGACATGATCAGCAAAATTTTGATAAACTATGCACATAATTCCCTTCAAGGGATTGTTAGGGACCACCAAGCAGTGAAAGGATGTTTTCCCGACTTGGAATTACAAAAGAAACAAAGAGTCATTGTTGAAGCCATTGCTGGCTTACTACCAACTCAATCAAGGAAAAGCCTGGTTCCTATGGCATTTCTCTCAAGTTTGTTGAAAGCTGCAATATCTGCATCAGCATCCACTTCATGCAGATCTGATTTGGAGAGAAGGATTGGTCTACAACTTGACCAGGCTATTCTTGAAGACATCCTAATCCCAACAAATTCACATCAAAACACACATGGGACTATTTATGACACGGATTCAATTTTGAGGATTTTTTCCAATTTTCTGAACTTGGATGAGGAGGATGAAGATGATAATAGTCACCTGAGAGATGAAAGTGAAATGGTTTATGACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATTCTGAAGGTATCCAAATTAATGGACAACTATCTAGCTGAAGTAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATATCCCTTGCTGAACTACTTCCAGATCATGCACGTATTGTGAGTGATGGACTCTATAGAGCCATTGATATATTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAACGGTACCGGCTATGCAAAACCATTGATTGCCAGAAAATGTCTCAAGAGGCATGCAGCCATGCAGCACAAAATGAAAGGTTACCAGTGCAGATGGCAGTTCAGGTTCTATACTTTGAGCAAATAAGGCTCCGCAATGCCATGAGTGGAGGGCACAGCCATGTCTTCTTTGGAGGAGGAGCAGGACTTAATGGTCAATTCCCTCAACGCTCAGGGAGTGGTGCAGGAAGTGGAGCCATTTCCCCTAGAGACAACTATGCATCAGTGAGAAGGGAGAACCGTGAGCTGAAGCTAGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGATCATGTTAACATGAAGCAGGAGCTAGTAAAGTCCCACCCTGCCAACAAGCTATTCAAATCATTCACCAAAAAACTAAGCAAGCTCAATGCTATGTTTCGGATTAACAGTATCAAGCCAAATGGTTCTGAGAGTCGCTTTCCTTTTCCTAAGAGAAGGCGTCACTCAGTTTCATGA 1893 0.4231 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASSFALHKFPLVSRSGRIRKMLLETKDSKVSRISLPNLPGGAEAFELAAKFCYGINVEFSLSNVAMLKCVAHFLKMTEEFADKNLETRAEAYLKETVLPNISNTISVLHRCESLVPISEEISLVSRLINAIANNACKEQLTTGLQKLDHSFPSKTTSNMEPETPSEWWGKSLNVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHQAVKGCFPDLELQKKQRVIVEAIAGLLPTQSRKSLVPMAFLSSLLKAAISASASTSCRSDLERRIGLQLDQAILEDILIPTNSHQNTHGTIYDTDSILRIFSNFLNLDEEDEDDNSHLRDESEMVYDFDSPGSPKQSSILKVSKLMDNYLAEVALDPNLLPSKFISLAELLPDHARIVSDGLYRAIDIFLKVHPNIKDSERYRLCKTIDCQKMSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMSGGHSHVFFGGGAGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVKSHPANKLFKSFTKKLSKLNAMFRINSIKPNGSESRFPFPKRRRHSVS* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1273 630 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Gso2g1273 630 Pfam BTB/POZ domain 37 122 IPR000210 GO:0005515
Gso2g1273 630 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Gso2g1273 630 Coils Coil 546 580 - -
Gso2g1273 630 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN SETH6 25 623 - -
Gso2g1273 630 SMART BTB_4 38 142 IPR000210 GO:0005515
Gso2g1273 630 Gene3D Potassium Channel Kv1.1; Chain A 24 144 IPR011333 -
Gso2g1273 630 PANTHER OS12G0117600 PROTEIN 25 623 IPR043454 -
Gso2g1273 630 Pfam NPH3 family 211 479 IPR027356 -
Gso2g1273 630 SUPERFAMILY POZ domain 22 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1273 Gso-Chr2 15777217 15782332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1273 1 453 EF-hand Containing Proteins AT2G47860 59.298 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1273 - - gmx:100814622 1173.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1273 2 15777217 15782332 Gso2g1273 2 15777217 15782332 ECH
Gso2g1273 2 15777217 15782332 Gso10g0180 10 1885717 1890801 GST
Gso19g1744 19 46298848 46303433 Gso2g1273 2 15777217 15782332 PCT
Gso3g1778 3 43540489 43544919 Gso2g1273 2 15777217 15782332 PCT
Gso2g1273 2 15777217 15782332 Gso19g1744 19 46298848 46303433 PCT
Gso2g1273 2 15777217 15782332 Gso3g1778 3 43540489 43544919 PCT