Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1270 ATGGAAAAGGTTATGAGGTTGGCAACTGAAAAGGGGGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTCTTCCAAGAGCTTGGAGTGATCCCTGTGGTTCATGAAATTGACAAAGACCCTGAGGGAAAGGAAATGGAGAAAGCTATAACAAGGTTGGGGAGTCCTACACCTGTTCCTGCAGTGTTCATCGGAGGGAAGCTGGTGGGGTCCACCAATGAAGTCATGTCCCTCCACCTTAGTGGTTCACTCACTCAACTGCTGAAACCATATCGAGCTTTGTCTTAA 306 0.4771 MEKVMRLATEKGVVVFTKSSCCLCYAVNILFQELGVIPVVHEIDKDPEGKEMEKAITRLGSPTPVPAVFIGGKLVGSTNEVMSLHLSGSLTQLLKPYRALS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1270 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
Gso2g1270 101 CDD GRX_GRXh_1_2_like 13 93 - -
Gso2g1270 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Gso2g1270 101 Pfam Glutaredoxin 13 75 IPR002109 -
Gso2g1270 101 Gene3D Glutaredoxin 1 101 - -
Gso2g1270 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Gso2g1270 101 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gso2g1270 101 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gso2g1270 101 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gso2g1270 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gso2g1270 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1270 Gso-Chr2 15740520 15741279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g1270 1 100 Miscellaneous Gene Families AT4G15660 49.000 2.65e-32 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1270 K03676 - gmx:100500442 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1270 2 15740520 15741279 Gso2g1270 2 15740520 15741279 ECH
Gso2g1270 2 15740520 15741279 Gso10g0185 10 1930644 1931442 GST
Gso19g1738 19 46269664 46270441 Gso2g1270 2 15740520 15741279 PCT
Gso3g1772 3 43512971 43513753 Gso2g1270 2 15740520 15741279 PCT
Gso2g1270 2 15740520 15741279 Gso19g1739 19 46272341 46273017 PCT
Gso2g1270 2 15740520 15741279 Gso3g1773 3 43515711 43516396 PCT