Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1738 ATGGACAAGGTGATGAGGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCACAAAGAGTTCTTGTTGCCTCTGCTATGCAGTTAACATTCTGTTTCAAGAACTTGGGGTGAATCCTGTGGTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCTCTATTGAGGCTAGGCTGCACTGCTCCAGTCCCAGCTGTGTTCATAGGAGGGAAGCTAAGGGGATCCACCAATGAAATCATGTCCCTCCACCTAAGTGGTTCACTCACTCAGATGCTGAAACCTTATCAGGCTTTGTCTTGA 306 0.4673 MDKVMRLASEKGVVIFTKSSCCLCYAVNILFQELGVNPVVHEIDHDPEGREMEKALLRLGCTAPVPAVFIGGKLRGSTNEIMSLHLSGSLTQMLKPYQALS* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1738 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Gso19g1738 101 CDD GRX_GRXh_1_2_like 13 93 - -
Gso19g1738 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gso19g1738 101 Gene3D Glutaredoxin 1 101 - -
Gso19g1738 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Gso19g1738 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Gso19g1738 101 Pfam Glutaredoxin 13 74 IPR002109 -
Gso19g1738 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1738 Gso-Chr19 46269664 46270441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1738 1 100 Miscellaneous Gene Families AT4G15660 51.000 1.36e-34 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1738 K03676 - gmx:100499748 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1738 19 46269664 46270441 Gso3g1772 3 43512971 43513753 GST
Gso19g1738 19 46269664 46270441 Gso2g1270 2 15740520 15741279 PCT
Gso19g1738 19 46269664 46270441 Gso10g0185 10 1930644 1931442 PCT