Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso19g1739 ATGGATAGAGTTAAGGACTTGGCATCAAAGAAGGCTGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATAAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTATGGGAAGGAAATGGAGTGGGCTTTGAGGGGTATGGGTTGTAACCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGCTCATCCAAAGATGTTATATCCCTCCATGTTGATGGCTCCCTCAAACAATTGCTCATGGATGCAAAAGCCATCTGGTTTTAG 309 0.4401 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGKEMEWALRGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLMDAKAIWF* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso19g1739 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Gso19g1739 102 Pfam Glutaredoxin 14 75 IPR002109 -
Gso19g1739 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Gso19g1739 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Gso19g1739 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Gso19g1739 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Gso19g1739 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Gso19g1739 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Gso19g1739 102 Gene3D Glutaredoxin 1 100 - -
Gso19g1739 102 CDD GRX_GRXh_1_2_like 12 93 - -
Gso19g1739 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso19g1739 Gso-Chr19 46272341 46273017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso19g1739 1 102 Miscellaneous Gene Families AT4G15700 50.000 3.37e-36 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso19g1739 K03676 - gmx:100819447 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g1739 19 46272341 46273017 Gso3g1773 3 43515711 43516396 GST
Gso19g1739 19 46272341 46273017 Gso2g1271 2 15750022 15750778 PCT
Gso19g1739 19 46272341 46273017 Gso10g0184 10 1919938 1920710 PCT
Gso2g1270 2 15740520 15741279 Gso19g1739 19 46272341 46273017 PCT
Gso10g0185 10 1930644 1931442 Gso19g1739 19 46272341 46273017 PCT