Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1258 ATGACCGGAGTGGTCATGGTTACCAAGGGAGGTGGATGCGGCGGCGGCAAGCGGGCGAGGGCGGCGCGAACCGCCGAGGAGGAAGAAGAGCAGCAGAACCAGCTGTCGCTGGTGGCGCTTCTGTTGGCGGCCATCAGAAAATCGATGGTGTCGTGCAGGGTGGACCCACCCGACGATGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAACCAACGTCCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGCTTCCTCGGTCTCCCCTATGAGTTCCAAGTTGAGATCCCTGCTAGGGTTCCCAGTGCTAGTGTAAGCGTGTTTGGGGTCTCAGCAGAATCTATGCAGTGTTCTTATGATCCAAAAGGAAACAGTGTCCCCACTATTCTCTTGCTAATGCAGGACCGTCTATACTCACAGGGAGGCTTAAAGGCTGAAGGTATATTTCGCATTAACCCTGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCGGATGACATTGATGTCCACTGTTTGGCTGGACTGATTAAAGCCTGGTTCCGAGAGCTACCTTCCGGAGTGCTAGATGGACTTTCCCCAGTGCAAGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAACAACTAAAGCCAACTGAGTCTGCCTTACTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGAGGAGGAACTTAACAAAATGAATGCAAGAAATATTGCAATGGTTTTTGCACCAAACATGACTCAGATGTCTGATCCTCTAACTGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTTATCATGAAGACACTTAGAGAACGCGAAGAAACAGCAACAGGTGGCTATTCTCCGATGTCATATCATTCATCAGATCGTCAGTCTGAGGATGAATACGACAGTCAGCGAGAAATGGACACAAGCGGTGAATTGAGAGGGACCAAATCAGACTATGATGATCGTGCTCACAATGGTCACAGCAGTGAAGGGGAGGCTGAATCTTTAAGCGAGATAGAGGATTGCTTCTTGAAGCAGTTGGATGAAAACACAGAAGGATTCTCAGAAGAACCTGCATATCATTTGGACAAGTATGTTAGCACCAGAAGTTGCTCTGGCTATAGCATAGAACCTTTTATATCTACTACTGATGGAAAAGCAGGAAATTCCTGCTTGAAGACAACACTGACCAGTCTGACCTCAAATGCTGACTCAAGTAACTCATCAATAGAATGTACCGGCACCAAAGATGTGGAGATGATGGATAAATTTGCAGATTCCATTTCAACCGTGCCACCACTCCTTGCTTCTAGTTAA 1371 0.4778 MTGVVMVTKGGGCGGGKRARAARTAEEEEEQQNQLSLVALLLAAIRKSMVSCRVDPPDDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPVQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEELNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETATGGYSPMSYHSSDRQSEDEYDSQREMDTSGELRGTKSDYDDRAHNGHSSEGEAESLSEIEDCFLKQLDENTEGFSEEPAYHLDKYVSTRSCSGYSIEPFISTTDGKAGNSCLKTTLTSLTSNADSSNSSIECTGTKDVEMMDKFADSISTVPPLLASS* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1258 456 ProSiteProfiles CRIB domain profile. 69 82 IPR000095 -
Gso2g1258 456 MobiDBLite consensus disorder prediction 297 355 - -
Gso2g1258 456 Gene3D Rho GTPase activation protein 100 295 IPR008936 GO:0007165
Gso2g1258 456 Gene3D CRIB domain 64 99 IPR036936 -
Gso2g1258 456 ProSiteProfiles Rho GTPase-activating proteins domain profile. 114 295 IPR000198 GO:0007165
Gso2g1258 456 Pfam P21-Rho-binding domain 68 99 IPR000095 -
Gso2g1258 456 SMART PBD_5 69 103 IPR000095 -
Gso2g1258 456 Pfam RhoGAP domain 131 265 IPR000198 GO:0007165
Gso2g1258 456 CDD RhoGAP 131 287 - -
Gso2g1258 456 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 415 - -
Gso2g1258 456 MobiDBLite consensus disorder prediction 310 355 - -
Gso2g1258 456 SUPERFAMILY GTPase activation domain, GAP 110 288 IPR008936 GO:0007165
Gso2g1258 456 SMART RhoGAP_3 128 291 IPR000198 GO:0007165
Gso2g1258 456 PANTHER MKIAA1688 PROTEIN 1 415 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1258 Gso-Chr2 15614953 15618285 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1258 - - gmx:100807134 830.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1258 2 15614953 15618285 Gso2g1258 2 15614953 15618285 ECH
Gso2g1258 2 15614953 15618285 Gso10g0195 10 2031125 2034378 GST
Gso3g1756 3 43376973 43380069 Gso2g1258 2 15614953 15618285 PCT
Gso2g1258 2 15614953 15618285 Gso3g1756 3 43376973 43380069 PCT