Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso10g0195 ATGACCGGAGTGGTCATGGTGACCAAGGGCGGTGGATGCGGCGGCGGCGGGAAGCGGACGAGGTCGGCGCGAACCGCCGAGGAGGAAGAAGAGCAGCAGAACCAGCTGTCGCTGGTGGCGCTTCTCTTGGCGGCCATCAGAAAATCGATGGTGTCGTGCAGGGTGGACCCACCCGAGGACGTAATCTCCACCGTCCATCACATGGAGATCGGATGGCCAACCAACGTCCAGCACATCACTCATGTCACCTTCGACCGCTTCAACGGCTTCCTCGGTCTTCCCTATGAGTTCCAAGTCGAGATCCCTGCCAGGGTCCCCAGTGCTAGTGTAAGTGTGTTTGGTGTCTCAGCAGAATCTATGCAGTGTTCTTATGATCCAAAAGGAAACAGTGTCCCCACTATTCTTTTGCTAATGCAGGACCGTCTATACTCGCAGGGAGGCTTGAAGGCTGAGGGTATATTTCGTATAAACCCCGAAAATAGTCAAGAGGAGCATGTGAGGGACCAGTTGAATAGGGGCATTGTGCCGGATGATATTGATGTCCACTGTTTAGCGGGGCTGATCAAAGCCTGGTTCCGAGAGCTACCTTCGGGAGTGCTAGATGGACTTTCCCCTGAGCAAGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTTGTGAAGCAGCTAAAGCCAACCGAGTCTGCTTTACTCAGCTGGGCTATTGATCTCATGGCTGATGTTGTAGAAGAGGAGGAATTTAACAAAATGAATGCTAGAAATATTGCAATGGTTTTTGCTCCAAACATGACTCAGATGTCTGATCCTCTAACAGCCCTGATGCATGCGGTTCAAGTGATGAACTTACTCAAGACACTCATCATGAAGACACTTAGAGAACACGAACAAACAGCAAAAGGTGGCTATTCTCCCATGTCATATCATTCATCAGATCGCCAGTCTGAGGATGAATACAGCAGTCAGCGAGAAATGGACACAAGCGGTGAATTGAGAGGAACCAAATCAGATTATGATGATCATGCCCACTATGGTCACAGTAGTGAAGGGGAAGCTGGATCTTTGAGTGAGATAGAGGAGGAGTGCTTCTTGAAGCAGTTGGATGAGAACAAAAAAGGATTCTCAGAGGAATCTGCAGGTTATTTGGATAAGTATGTTAGCACCAGGAGTTTCTCTGGCTATAACATGGAACCTTCTATATCTGTTACTGATGGCAAAGCAGGGAATTCCTGCTTGAGTACAACACTGACTGATTTGGCCTCAAATGTTGACTCAAGTAGTTCATCAATAGGATGTACCGGCACCAAAGATGTGGAGATGATGGATAAGTTTGCAGATTCTATTTCACCTGTGCCACCACTCCTTGCTTCTAGTTAA 1377 0.4822 MTGVVMVTKGGGCGGGGKRTRSARTAEEEEEQQNQLSLVALLLAAIRKSMVSCRVDPPEDVISTVHHMEIGWPTNVQHITHVTFDRFNGFLGLPYEFQVEIPARVPSASVSVFGVSAESMQCSYDPKGNSVPTILLLMQDRLYSQGGLKAEGIFRINPENSQEEHVRDQLNRGIVPDDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTESALLSWAIDLMADVVEEEEFNKMNARNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREHEQTAKGGYSPMSYHSSDRQSEDEYSSQREMDTSGELRGTKSDYDDHAHYGHSSEGEAGSLSEIEEECFLKQLDENKKGFSEESAGYLDKYVSTRSFSGYNMEPSISVTDGKAGNSCLSTTLTDLASNVDSSSSSIGCTGTKDVEMMDKFADSISPVPPLLASS* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso10g0195 458 MobiDBLite consensus disorder prediction 9 28 - -
Gso10g0195 458 MobiDBLite consensus disorder prediction 311 347 - -
Gso10g0195 458 Pfam P21-Rho-binding domain 69 100 IPR000095 -
Gso10g0195 458 CDD RhoGAP 132 288 - -
Gso10g0195 458 Gene3D Rho GTPase activation protein 101 299 IPR008936 GO:0007165
Gso10g0195 458 SUPERFAMILY GTPase activation domain, GAP 111 289 IPR008936 GO:0007165
Gso10g0195 458 SMART RhoGAP_3 129 292 IPR000198 GO:0007165
Gso10g0195 458 MobiDBLite consensus disorder prediction 298 355 - -
Gso10g0195 458 Pfam RhoGAP domain 132 266 IPR000198 GO:0007165
Gso10g0195 458 Gene3D CRIB domain 65 100 IPR036936 -
Gso10g0195 458 SMART PBD_5 70 104 IPR000095 -
Gso10g0195 458 PANTHER RHO GTPASE ACTIVATION PROTEIN-RELATED 1 421 - -
Gso10g0195 458 ProSiteProfiles CRIB domain profile. 70 83 IPR000095 -
Gso10g0195 458 ProSiteProfiles Rho GTPase-activating proteins domain profile. 115 300 IPR000198 GO:0007165
Gso10g0195 458 PANTHER MKIAA1688 PROTEIN 1 421 IPR044785 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso10g0195 Gso-Chr10 2031125 2034378 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso10g0195 - - gmx:100801481 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1258 2 15614953 15618285 Gso10g0195 10 2031125 2034378 GST
Gso3g1756 3 43376973 43380069 Gso10g0195 10 2031125 2034378 PCT
Gso10g0195 10 2031125 2034378 Gso3g1756 3 43376973 43380069 PCT