Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g1241 ATGGCGGCTGGCCCTACAACAACATCACCCTCCGATCGACCCACCATGGTCCCTCCCCCAATGCTCGTCTCCGACTCCTTCGCCAAGGACGCCATCCTCGCCTGGTTCCGCGGCGAGTTCGCTGCCGCCAACGCCATCATCGACGCCCTCTGCGCCCACCTCTCCGCCTCCTCCGCCCACGATTACGACGCCGTCTTCACCGCCATCCACCGCCGCAGGCTCAATTGGATCCCCGTCCTCCAGATGCAGAAGTACCACTCCATCGCCGACGTCACGCTCGAGCTCGCCAGACTCGCCGACAGAAACCACAACGCTGCCGCCGCCGAACACGAAACCGACGAAAAAACGACGCCGTCGGAGAGTGTCGGAAATGGAGGTGGCGGTGACGAACACGAGGAGTATGAGTCCCCCGAGAGCGAGATTACTGATTCAGGATCTCAAGAAATGCAGGCTAGTCCCATGAACGTTAATATATGTTCCAATCATGAAGAGTGTGAAGGACGTTCTTCACAGTTTAAGTTGACAAAAGGCTTCGCAGCAAAAGAGTCAGTGAAGGGACATATGGTGAATGTAGTAAAAGGATTGAAGTTATATGAGGACATTTTCACTGATTCAGAACTGTGCAAGCTAACAGATTTTGTGAATGAGATCCATGCTGCTGGCCAGAATGGGGAACTGTCAGGTGAAACTTTTATATTATTCAACAAGCAGATGAAAGGGAACAAGAGAGAGCTGATTCAACTGGGTGTTCCAATATTTGGACAGATAAAGGAGGACGCAAAAAGCAATATAGAGCCAATTCCAGTACTTCTCCAAGGTGTCATTGATCACCTTATTCAGTGGCAATTACTTCCCGAGTACAAAAGACCAAATGGTTGTATCATCAACTTCTTTGAAAAGGGGGAGTTTTCTCAGCCATTCCTGAAACCACCGCATCTGGATCAACCTGTGTCCACACTTCTTCTCTCTGAATCAGCTATGGCTTTTGGGCGTATACTTATGAGTGAAAATGATGGGAACTACAAGGGGCCACTCACGCTCTCACTGAAGCAGGGGTCTCTTTTAGTGATGAGAGGAAACAGTGCTGACATGGCAAGGCACGTAATGTGTCCATCCCCTAACAGAAGGGTCAGCATCACCTTCTTCAGAGTGAGGCCAGACTCCAACCAATGCCAAACACCAACTCCCACTACCATGACAAGTGCAATGACTATGTGGCAACCGGGCATTGCTGCTAGTCCATATGCTTTGCCAAATAGTGCTCTAACTAGCTATGAGGGTATGGACATGAACATGATGCCCAAATGGGGAATGCTTCACGCTCCAATGGTGATGCTTACTCCTATGCGTCCTGTGGCGCTGAACCCTCGCAAACTTGCTGGTGGTGGGACTGGGGTGTTTTTGCCCTGGAATGTGCCATCTAGAAAACCTGCCAAGCATCTTCCCCCACGTGCACAAAAAGGAAGGCTTCTCACATTACCTTCCTCCGTTGAACCACAAATGGGAGAGTCCACTTCTGAACCAAGCATTTGTGTTGAAGGATAA 1545 0.5029 MAAGPTTTSPSDRPTMVPPPMLVSDSFAKDAILAWFRGEFAAANAIIDALCAHLSASSAHDYDAVFTAIHRRRLNWIPVLQMQKYHSIADVTLELARLADRNHNAAAAEHETDEKTTPSESVGNGGGGDEHEEYESPESEITDSGSQEMQASPMNVNICSNHEECEGRSSQFKLTKGFAAKESVKGHMVNVVKGLKLYEDIFTDSELCKLTDFVNEIHAAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPVLLQGVIDHLIQWQLLPEYKRPNGCIINFFEKGEFSQPFLKPPHLDQPVSTLLLSESAMAFGRILMSENDGNYKGPLTLSLKQGSLLVMRGNSADMARHVMCPSPNRRVSITFFRVRPDSNQCQTPTPTTMTSAMTMWQPGIAASPYALPNSALTSYEGMDMNMMPKWGMLHAPMVMLTPMRPVALNPRKLAGGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLTLPSSVEPQMGESTSEPSICVEG* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g1241 514 SUPERFAMILY Clavaminate synthase-like 186 385 - -
Gso2g1241 514 MobiDBLite consensus disorder prediction 105 150 - -
Gso2g1241 514 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 289 386 IPR005123 -
Gso2g1241 514 PANTHER 2OG-FE(II) OXYGENASE FAMILY OXIDOREDUCTASE 12 512 - -
Gso2g1241 514 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 12 512 IPR044842 GO:0003729|GO:0006402|GO:0032451
Gso2g1241 514 MobiDBLite consensus disorder prediction 474 514 - -
Gso2g1241 514 Gene3D - 178 393 IPR037151 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g1241 Gso-Chr2 15425522 15431458 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g1241 K10767 - gmx:100791586 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g1241 2 15425522 15431458 Gso2g1241 2 15425522 15431458 ECH
Gso2g1241 2 15425522 15431458 Gso10g0210 10 2178864 2184404 GST
Gso19g1270 19 41235416 41241878 Gso2g1241 2 15425522 15431458 PCT
Gso3g1269 3 38365461 38372488 Gso2g1241 2 15425522 15431458 PCT
Gso2g1241 2 15425522 15431458 Gso19g1270 19 41235416 41241878 PCT
Gso2g1241 2 15425522 15431458 Gso3g1269 3 38365461 38372488 PCT